Pairwise Alignments

Query, 359 a.a., ABC transporter, substrate binding protein (amino acid) from Agrobacterium fabrum C58

Subject, 371 a.a., branched-chain amino acids ABC transporter - periplasmic leucine binding subunit from Pseudomonas putida KT2440

 Score =  102 bits (253), Expect = 2e-26
 Identities = 87/360 (24%), Positives = 156/360 (43%), Gaps = 20/360 (5%)

Query: 1   MLSVRLLTIIAGFAFAGSASAASIGIVAPQNGPYELLGQQVRQGAKAAAAKLG------- 53
           + +  +L  +A  +FA  A    IGI  P+ GP    G     GAK A   +        
Sbjct: 7   LFAAMVLAGVASHSFA--ADTIKIGIAGPKTGPVTQYGDMQFIGAKQAIKDINAAGGVDG 64

Query: 54  --LDVVEIHESCEDGSGGAIADGLVAAKVSAAIGFLCTETLQGVLPPLKAAAIPAITLSS 111
             L+  E  ++C+     A+A+ +V   V   +G LC+ + Q      +   +  IT ++
Sbjct: 65  KMLEAKEYDDACDPKQAVAVANKVVNDGVKFVVGHLCSSSTQPASDIYEDEGVIMITPAA 124

Query: 112 RAPILMEDSLKYGWPLFRLSPSDRAESDRIAEIILRDWKGHSIGLVDDGTIYSRELVDRI 171
            +P +     K    +FR    D A+       I    K   + ++ D   Y   +   +
Sbjct: 125 TSPEITARGYKL---IFRTIGLDSAQGPAAGNYIADHVKPKVVAVLHDKQQYGEGIATAV 181

Query: 172 RASLEENGLKPTFSDTMRPNQEQQVALVRRLARTGISHVFVGAERNDVAIIARDAASENL 231
           + +LE  G K    + +    +   +++++L +  +  V+ G    ++ +I R A  + L
Sbjct: 182 KQTLESKGTKVAVFEGLNAGDKDFSSIIQKLKQNNVDFVYYGGYHPELGLILRQAQEKGL 241

Query: 232 ALTIMGGDAM-NAANNPVPLTANV-LAVTRP-AYDTLPSAQAANGELRAAGIEPEG-YVL 287
               MG + + N + + +   A+  L VT P ++D  P+ +     ++A G +P G +V 
Sbjct: 242 KAKFMGPEGVGNDSISQIAQNASEGLLVTLPKSFDADPANKKIVDAIKADGKDPSGPFVF 301

Query: 288 PAYAATELTA-ALAEATQAQSKPAPEILAGGTVFKTVIGDLGFTPSHDLSDNPYRLQRWN 346
           PAY+A EL A  + +A    +    E +  GT FKT  GDL F    DL D  + +  W+
Sbjct: 302 PAYSAVELIAQGIKKAGSDDTDKVAEAIHKGT-FKTPTGDLSFDDKGDLKDFKFVVYEWH 360