Pairwise Alignments

Query, 363 a.a., hypothetical protein from Agrobacterium fabrum C58

Subject, 369 a.a., anhydro-N-acetylmuramic acid kinase (NCBI) from Escherichia coli BW25113

 Score =  187 bits (474), Expect = 5e-52
 Identities = 134/373 (35%), Positives = 181/373 (48%), Gaps = 25/373 (6%)

Query: 1   MSGTSMDGIDIAVLRTDGESVVRHGPSGYFPYDPGLRGIWQKALTTAKAIRERRERPGDL 60
           MSGTS+DG+D+ VL T  E  V    S  +P    L+   Q  L   +    ++      
Sbjct: 10  MSGTSLDGVDV-VLATIDEHRVAQLASLSWPIPVSLK---QAVLDICQG---QQLTLSQF 62

Query: 61  GEAERKLTLAHAAAVKSFLHRHRFDVGDIDVIGFHGQTVLHRPDEAL--TVQIGDGALLA 118
           G+ + +L    A AV + L        DI  IG HGQTV H P      T+QIGD   + 
Sbjct: 63  GQLDTQLGQLFADAVNALLKEQNLQARDIVAIGCHGQTVWHEPTGVAPHTLQIGDNNQIV 122

Query: 119 EETGIDVVYDMRANDMVHGGQGAPLIPAYHMALSANLPDGFETPAVFVNIGGISNLTYIG 178
             TGI VV D R  D+  GGQGAPL+PA+H AL A+  +      + +NIGGI+NL+ + 
Sbjct: 123 ARTGITVVGDFRRRDIALGGQGAPLVPAFHHALLAHPTER----RMVLNIGGIANLSLLI 178

Query: 179 EGGRLAAFDSGPGNMLIDQWIEAHTGKAFDKGGRTAAGGSVVASLVARYMESPFFSANIR 238
            G  +  +D+GPGNML+D WI    GK +DK    A  G V+  L+   +  P+FS    
Sbjct: 179 PGQPVGGYDTGPGNMLMDAWIWRQAGKPYDKDAEWARAGKVILPLLQNMLSDPYFSQPAP 238

Query: 239 RSLDRSDF--------VPPQKGEVSLADGARTLSHLTGAAILKSASYLPEAAKTYVVCGG 290
           +S  R  F        +    G V   D   TL+ LT   I +    L    +  +VCGG
Sbjct: 239 KSTGREYFNYGWLERHLRHFPG-VDPRDVQATLAELTAVTISEQV-LLSGGCERLMVCGG 296

Query: 291 GRLNPVIMEELAGLAAKQGARVIAAEEAGFDGGAMEAEAWAYLAVRSLRGLPLTYPGTTG 350
           G  NP++M  LA L    G  V   +  G  G  MEA A+A+LA R+L GLP   P  TG
Sbjct: 297 GSRNPLLMARLAALL--PGTEVTTTDAVGISGDDMEALAFAWLAWRTLAGLPGNLPSVTG 354

Query: 351 VKEPVTGGVLVRA 363
             +    G +  A
Sbjct: 355 ASQETVLGAIFPA 367