Pairwise Alignments

Query, 432 a.a., HlyD family secretion protein from Agrobacterium fabrum C58

Subject, 392 a.a., ABC export system, membrane fusion protein from Pseudomonas putida KT2440

 Score =  123 bits (308), Expect = 1e-32
 Identities = 92/336 (27%), Positives = 152/336 (45%), Gaps = 23/336 (6%)

Query: 29  RKKKSRRFLYIAAAIVLIGGGLGYYYQSRAAGVAYNYTTEPARQGDLSVIVTSTGSVQPT 88
           R   +RR L +   + L+G G    + S   G A   +T    + D+   VT+ G++QP 
Sbjct: 3   RSTHTRRRLLLGG-LGLLGLGSLLAWTSLPFG-AQPVSTVAVTRADIESSVTALGTLQPR 60

Query: 89  DQVDISSELSGTVRKVNVTYNTPVKSGDILAELDTNKLEADVQSARAKLASAKANVLKAR 148
             VD+ ++ SG +R ++V     V  G +L E+D +  +A + + R  + + KA + + R
Sbjct: 61  RYVDVGAQASGQIRNLHVEVGDQVHKGQLLVEIDPSTQQAKLDAGRFSIDNLKAQLAEQR 120

Query: 149 ADLGSAKTSMERLRSLVQSRVSSQQDLDAAQFTHDAAAATLQVNEATVLSAEADLRLAEV 208
           A L  A+  ++R R L     + ++DL  A+   +   A + + +A +  A A LR  E 
Sbjct: 121 AQLKLAQQQLKRQRDLAAVGATREEDLQTAEAQLNVTQARIDMYQAQIRQANASLRSDEA 180

Query: 209 NLGKAKIVSPIDGVILTRSVDPGATVASSLNAPVLFTIAGDLRHMELQVSVDEADVGKVE 268
            LG  +I +P+DG ++      G T+ +    P++  IA  L  M +   V EAD+GK++
Sbjct: 181 ELGYTRIFAPMDGTVVAVDAREGQTLNAQQQTPLILRIA-KLSPMTVWAQVSEADIGKIQ 239

Query: 269 TGQKATFNVDAYPDRSFPAEIETV--------------------RFASETVSNVVTYKGI 308
            G  A F   A   R + + +  V                      A  T S VV Y  +
Sbjct: 240 PGMTAYFTTLAGGKRRWTSTVRQVLPIPPKPLDQTSQGGGSPASATAGATGSQVVQYTVL 299

Query: 309 LTVDNAELLLRPGMTATANIIVEEIKDTLLVPNSAL 344
           L VDN +  L   MT     +V +    L  P +AL
Sbjct: 300 LDVDNPDGALMAEMTTQVFFVVGQASQVLSAPLAAL 335