Pairwise Alignments

Query, 432 a.a., HlyD family secretion protein from Agrobacterium fabrum C58

Subject, 371 a.a., RND family efflux transporter, MFP subunit from Enterobacter asburiae PDN3

 Score =  135 bits (340), Expect = 2e-36
 Identities = 92/314 (29%), Positives = 160/314 (50%), Gaps = 3/314 (0%)

Query: 31  KKSRRFLYIAAAIVLIGGGLGYYYQSRAAGVAYNYTTEPARQGDLSVIVTSTGSVQPTDQ 90
           K  RR L++  A+ ++ GG  + +Q   A V   Y T   R G+L   V +TG +    +
Sbjct: 4   KGKRRTLFLLLAVAILAGGY-WLWQVLNAPVP-QYQTLIVRPGELQQNVLATGKLDALRK 61

Query: 91  VDISSELSGTVRKVNVTYNTPVKSGDILAELDTNKLEADVQSARAKLASAKANVLKARAD 150
           VD+ +++SG ++ ++V     VK G +L  +D  + E  ++   A L   +A   +A A+
Sbjct: 62  VDVGAQVSGQLKTLSVEIGDKVKKGQLLGVIDPEQAENQIREVEATLMELRAQRAQALAE 121

Query: 151 LGSAKTSMERLRSLVQSRVSSQQDLDAAQFTHDAAAATLQVNEATVLSAEADLRLAEVNL 210
              A+ ++ R ++L +++  S+QDLD A        A +   +A +   +A L  A+ NL
Sbjct: 122 RNLAQVTLTRQQALAKTQAISKQDLDTATTELAVKQAQIGTIDAQIKRNQASLDTAKTNL 181

Query: 211 GKAKIVSPIDGVILTRSVDPGATVASSLNAPVLFTIAGDLRHMELQVSVDEADVGKVETG 270
              KIV+P+ G +   +   G TV ++  AP + T+A D+  M ++  V EADV  ++ G
Sbjct: 182 DYTKIVAPMAGEVTQITTLQGQTVIAAQQAPNILTLA-DMSTMLVKAQVSEADVIHLKPG 240

Query: 271 QKATFNVDAYPDRSFPAEIETVRFASETVSNVVTYKGILTVDNAELLLRPGMTATANIIV 330
           Q A F V   P   +   ++ +    E V++ + Y     V N + +LR  MTA  +I +
Sbjct: 241 QNAWFTVLGDPQTRYEGVLKDILPTPEKVNDAIFYYARFEVPNPQGVLRLDMTAQVHIQL 300

Query: 331 EEIKDTLLVPNSAL 344
             +K+ L +P SAL
Sbjct: 301 TGVKNVLTIPLSAL 314