Pairwise Alignments

Query, 307 a.a., ABC transporter, membrane spanning protein (sugar) from Agrobacterium fabrum C58

Subject, 307 a.a., Nucleoside ABC transporter, permease protein 2 from Variovorax sp. SCN45

 Score =  171 bits (434), Expect = 2e-47
 Identities = 106/288 (36%), Positives = 159/288 (55%), Gaps = 5/288 (1%)

Query: 1   MMDMLQ--AILLTVITAATPLVIAASGELVAERSGVLNLGVEGMMIMGAVCAFAATHMTG 58
           ++D+L   A  + V+  ATPL++   G L+ ER+GVLNLG+EG+M+ GA   + A +   
Sbjct: 4   LLDILANPAFWVAVLRIATPLILGTLGVLLCERAGVLNLGIEGIMVAGAFTGWLAVYAGA 63

Query: 59  SPYLGILAGIASGAVFSLLFGFLTLTLVTNQVATGLALTILGLGVSGMLGESFVGLPGIK 118
             ++G+     +G VF LL  FLT+ L  +Q  +GL +T+L   +S   G   V  P + 
Sbjct: 64  PLWVGVGVAALTGMVFGLLHAFLTVGLALSQHVSGLGITLLATALS-YFGYR-VSFPKVN 121

Query: 119 LQPIVFPVLSEIPFIGPLLFRQDLIFYMSIALVFGISWFLFKSRAGLKIRAIGDNHASAH 178
             P + P         P+L  Q  +   ++ LV  + W L+++  GL +R  G+N  +A 
Sbjct: 122 TPPTITPFAPMDWLPVPILNAQTALTLFALLLVPVVGWVLYRTPLGLALRMAGENPQAAE 181

Query: 179 ALGINVIRTRYLAVMFGGACAGLAGAQLSLVYTPQWVENMSAGRGWIALALVVFASWRPW 238
           + G++V  TR  A++ G A  G+AG+ L+L     +  NM  GRGWI +ALVVFASWRP 
Sbjct: 182 SQGVSVAATRTGAIVAGSALMGMAGSFLTLSAFNAFFFNMVNGRGWICVALVVFASWRPG 241

Query: 239 RLLAGGYLFGAVTIGQLHAQAFGIGV-PSQLLSALPYLATIVVLVIIS 285
           + L G  LF      QL  Q  G  V P QL   LPYL +I+ LV+++
Sbjct: 242 KALLGALLFAFFDALQLRLQQSGDAVLPYQLYLMLPYLLSILALVLVA 289