Pairwise Alignments

Query, 346 a.a., transcriptional regulator, AraC family from Agrobacterium fabrum C58

Subject, 335 a.a., Transcriptional regulator, AraC family from Pseudomonas putida KT2440

 Score =  167 bits (422), Expect = 5e-46
 Identities = 106/324 (32%), Positives = 171/324 (52%), Gaps = 21/324 (6%)

Query: 4   NSQKKRSIVFFLIPQFTMLPFAAAVETLRIANRMLGYAAYEWRLSSLDGQKVMSSSGICL 63
           N+Q    + F L+  F+M  F  A++ L  AN +L   ++++   SLDG +V+S  G+ L
Sbjct: 25  NAQAPYRVDFILLEHFSMASFTVAMDVLVTAN-LLRADSFQFTPLSLDGDRVLSDLGLEL 83

Query: 64  EVDTCLADERRYVSGENRPEMAIICSGIDVDQHVNKSVNAWLREAYNRGIAIGSLCTAAH 123
                 A   + +      ++ ++C G+       + ++  L +    G+A+G L   A 
Sbjct: 84  VATELSAAALKEL------DLLVVCGGLRTPLKYPE-LDRLLNDCAAHGMALGGLWNGAW 136

Query: 124 ILAQAGLLNGKRCAIHWENLPGFSEAFPQVEVYADLFEVDSNIYTCAGGTASLDMMLSLI 183
            L +AG+L+   C+IH E     SE  PQ  +    F +D +  + A    ++++ML L+
Sbjct: 137 FLGRAGVLDDYGCSIHPEQRASLSERSPQTRITPASFTLDRDRLSAASPNGAMELMLGLV 196

Query: 184 GQDFGENLVNRVCEQQLTDRVR----SPNDRQRLPLRARLGVQNSKVLSIIELMEGNLSE 239
            + +G+ L   V E       R     P  ++ + L  R         +I+ELME NL E
Sbjct: 197 RRLYGDGLAEGVEEILSFSGARYRQVGPGAKKSMSLHLR---------TIVELMENNLEE 247

Query: 240 PLSLLDIADAADLSRRQVERLFRQEMGRSPARYYLEIRLDRARHLLVQSAMPVVEVAVAC 299
            LSL  +A  +  SRRQ++RLF+ ++G SP RYY+E+R+ ++R LL  S + V+EVAVAC
Sbjct: 248 TLSLDQLAAYSGRSRRQIDRLFQAQLGTSPRRYYMELRITKSRRLLQYSDLSVMEVAVAC 307

Query: 300 GFVSASHFSKCYREIYNRTPQQER 323
           GFVS SHFSKCY   +   P +E+
Sbjct: 308 GFVSVSHFSKCYAAYFGYPPSREQ 331