Pairwise Alignments

Query, 346 a.a., transcriptional regulator, AraC family from Agrobacterium fabrum C58

Subject, 322 a.a., AraC family transcriptional regulator from Agrobacterium fabrum C58

 Score =  146 bits (369), Expect = 6e-40
 Identities = 99/323 (30%), Positives = 153/323 (47%), Gaps = 26/323 (8%)

Query: 11  IVFFLIPQFTMLPFAAAVETLRIANRMLGYAAYEWRLSSLDGQKVMSSSGICLEVDTCLA 70
           + F L   F+ +  A+A+E LR A  + G   + W+L SLDG  ++SSS   +  D  L 
Sbjct: 9   LTFLLFESFSNMVLASAIEPLRAARDLSGRQLFSWQLCSLDGNAIISSSRAAIAADLPL- 67

Query: 71  DERRYVSGENRPEMAIICSGIDVDQHVNKSVNAWLREAYNRGIAIGSLCTAAHILAQAGL 130
                 S     +  I+ +G  +  H+N+   A +R        +G L T A +LA+ GL
Sbjct: 68  ------SRVGATDALILVAGYGIRNHLNQESAAAVRRKARGLPIVGGLDTGAWLLARIGL 121

Query: 131 LNGKRCAIHWENLPGFSEAFPQVEVYADLFEVDSNIYTCAGGTASLDMMLSLIGQDFGEN 190
           L G+R  IHW     F+E FP+V V    + VD NI TC    + L   L LIG+   E 
Sbjct: 122 LAGRRATIHWMEKKEFAENFPEVRVTDAPYVVDGNIVTCGDAQSVLTWSLDLIGKHADEA 181

Query: 191 L----------VNRVCEQQLTDRVRSPNDRQRLPLRARLGVQNSKVLSIIELMEGNLSEP 240
           L          V +  E+ L   +        LP         + +   I +M     +P
Sbjct: 182 LRFDVANMFGGVQKSAERTLARGLSGRMSDHGLP---------AALQRAIVVMRETAEQP 232

Query: 241 LSLLDIADAADLSRRQVERLFRQEMGRSPARYYLEIRLDRARHLLVQSAMPVVEVAVACG 300
           L L DIAD   +S R ++RLF + +G S  +YY +IRL  AR L +++ + + E+A   G
Sbjct: 233 LKLPDIADRVAVSERSLDRLFHRYLGMSAGQYYSQIRLSHARALALETNLTLYEIAFRTG 292

Query: 301 FVSASHFSKCYREIYNRTPQQER 323
           F S S  ++ YR  +  T ++++
Sbjct: 293 FSSPSTLARAYRLKFGETLRRKK 315