Pairwise Alignments

Query, 346 a.a., transcriptional regulator, AraC family from Agrobacterium fabrum C58

Subject, 324 a.a., AraC family transcriptional regulator from Agrobacterium fabrum C58

 Score =  180 bits (457), Expect = 4e-50
 Identities = 112/313 (35%), Positives = 157/313 (50%), Gaps = 6/313 (1%)

Query: 11  IVFFLIPQFTMLPFAAAVETLRIANRMLGYAAYEWRLSSLDGQKVMSSSGICLEVDTCLA 70
           I F L+P F ++ +A+A E LR AN + G   Y+    S DG+ V SSSGI +  +   A
Sbjct: 12  IGFILVPNFALMSYASAAEPLRAANLIAGTDLYDAVPLSFDGEAVRSSSGIIVSCEALAA 71

Query: 71  DERRYVSGENRPEMAIICSGIDVDQHVNKSVNAWLREAYNRGIAIGSLCTAAHILAQAGL 130
                 +GE    + +   G   D    ++    LR    +G+ IGS+ + A++LA AGL
Sbjct: 72  ------AGEKCHTIFVCAGGGPQDWTAAENSYGTLRRLARQGVRIGSISSGAYVLAAAGL 125

Query: 131 LNGKRCAIHWENLPGFSEAFPQVEVYADLFEVDSNIYTCAGGTASLDMMLSLIGQDFGEN 190
           L  +   IHWE+ P   EAF  +      F  D +  TCAGG A LDMM ++I Q  G +
Sbjct: 126 LENRDFTIHWEHAPVLKEAFGHLTPRQARFVFDGDRITCAGGVAPLDMMHAMISQRMGAH 185

Query: 191 LVNRVCEQQLTDRVRSPNDRQRLPLRARLGVQNSKVLSIIELMEGNLSEPLSLLDIADAA 250
              RV +  L   V  P   QR     R G  +  +L+++E ME  +  PL    +A  A
Sbjct: 186 FARRVSDWYLHTAVAEPGAPQRGSSAERYGTNHPALLTVLEKMETTIESPLDRQTMAKLA 245

Query: 251 DLSRRQVERLFRQEMGRSPARYYLEIRLDRARHLLVQSAMPVVEVAVACGFVSASHFSKC 310
             S R ++RLF   +  S    Y  IRLD AR LL QS + + EVA A GF SA HFS  
Sbjct: 246 GTSARHLDRLFATHLKSSFLETYRAIRLDHARRLLEQSPLSIAEVAFATGFSSAGHFSGS 305

Query: 311 YREIYNRTPQQER 323
           ++  + +TP   R
Sbjct: 306 FKTRFGQTPNAMR 318