Pairwise Alignments

Query, 577 a.a., ABC transporter, nucleotide binding/ATPase protein from Agrobacterium fabrum C58

Subject, 601 a.a., lipid transporter ATP-binding/permease from Pseudomonas simiae WCS417

 Score =  323 bits (828), Expect = 1e-92
 Identities = 213/575 (37%), Positives = 309/575 (53%), Gaps = 17/575 (2%)

Query: 4   RFFAYYRPYRGLFILDFSCAVLSGVLELGFPMAVKAFVD-------VLLPGGQW--GIIL 54
           R  +Y RPY GLF L     ++    +      +K FVD       VL P   +   + L
Sbjct: 18  RLLSYVRPYAGLFALSILGFLIFASTQPMLGYILKYFVDGLSNPEAVLFPSVPFLRDLQL 77

Query: 55  AASVGLLVIYVLN-TGLMATV-TYWGHMLGINIETDMRRLAFDHLQKLSFRYFDNQKTGH 112
             +V LL+I +    GL + +  Y    + + +  D+R   F++L  L  RYFDN  +GH
Sbjct: 78  LQAVPLLIILIAAWQGLGSFLGNYLLAKVSLGLVHDLRVQLFNNLLTLPNRYFDNHNSGH 137

Query: 113 LVGRLTKDLEEIGEVAHHGPEDLFIAIMTFIGAFLLMMSVNVQLALVTAAVVPVTAWVTS 172
           L+ R+T ++  +   A    + +    MT I  F  ++ +N +L LV  A++P+ A + S
Sbjct: 138 LISRITFNVTMVTGAATDAIKVVIREGMTVIFLFASLLFMNWRLTLVMIAILPLIAVMVS 197

Query: 173 RYGGRMTQNFRALYGRVGDFNARIEENVGGMRVVQAFANEDHERSLFEKDNQKYRRTKLD 232
               +  +  + +   +GD      E + G RVV++F  E +E   F K +Q     +L 
Sbjct: 198 TASKKFRKQSKKIQVAMGDVTHVASETIQGYRVVRSFGGEVYEEKRFLKASQSNTNKQLR 257

Query: 233 AYKIMAASTSLSYMSMRLTQMIVMICGAWFVLNGSLTEGGFVGFLLLVGVFFRPVEKINS 292
             +  A  T    + +     ++M    +  L G  + G  V ++ L G+  +P+ +++ 
Sbjct: 258 MTRTGAIYTPALQLVIYTAMAVLMFLVLY--LRGDASAGDMVAYITLAGLLPKPIRQLSE 315

Query: 293 VIETYPKGIAGFRRFTELLDTAPDIVDAPDAIDAPALSGAIEYRHVGFGYAEGKR-VLDN 351
           V  T  KG+AG     E LD   ++      I+   +SG ++ R++ F Y   +R VL +
Sbjct: 316 VSSTIQKGVAGAESIFEQLDEEVEVDRG--TIERDKVSGRLDVRNLNFTYPGTERHVLKD 373

Query: 352 IDLKISAGETVAFVGPSGAGKTTLCSLLPRFYDVTSGSITIDGIDIRKMKLASLRNQIGI 411
           I      G+ +A VG SG+GK+TL SL+PRFY   SG I +DGI+I   KL +LR  I  
Sbjct: 374 ISFTAEPGQMIALVGRSGSGKSTLASLIPRFYHHESGEILLDGIEIENYKLLNLRKHIAQ 433

Query: 412 VQQDVFLFGGTIRENIEYGRL-GASDEEIMDAARRARLDGVIEAMPLGLDTVIGERGVKL 470
           V Q V LF  T+  NI YG L GA   E+  AA  A     I+ +P G DT +GE GV L
Sbjct: 434 VTQHVTLFSDTVTNNIAYGDLAGAPRAEVEAAAADANAKDFIDQLPKGFDTQVGENGVLL 493

Query: 471 SGGQKQRLAIARMFLKNPPILILDEATSALDTETERAIQQSLTELAKGRTTLVIAHRLAT 530
           SGGQ+QRLAIAR  LKN P+LILDEATSALDTE+ER IQ +L ++ +GRTTLVIAHRL+T
Sbjct: 494 SGGQRQRLAIARALLKNAPLLILDEATSALDTESERHIQAALDKVMQGRTTLVIAHRLST 553

Query: 531 IRDASRIVVVDQTGIAETGAHAELLAAKGHYSRLH 565
           I  A  I+V+D   I E G H ELLA  G+Y+RLH
Sbjct: 554 IEKADLILVMDDGRIVERGTHGELLAQNGYYARLH 588