Pairwise Alignments

Query, 577 a.a., ABC transporter, nucleotide binding/ATPase protein from Agrobacterium fabrum C58

Subject, 586 a.a., Efflux ABC transporter, permease/ATP-binding protein from Variovorax sp. SCN45

 Score =  302 bits (774), Expect = 2e-86
 Identities = 196/571 (34%), Positives = 291/571 (50%), Gaps = 8/571 (1%)

Query: 8   YYRPYRGLFILDFSCAVLSGVLELGFPMAVKAFVD---VLLPGGQWGIILAASVGLLVIY 64
           + RPYR   +L     V++ V  L FP+A+++ +D   V    G   + L    G L   
Sbjct: 15  FLRPYRVQIVLAGVFLVMAAVTTLAFPIALRSLIDGGFVNPDKGAQTMALRDHFGALFAV 74

Query: 65  VLNTGLMATVTYWG-HMLGINIETDMRRLAFDHLQKLSFRYFDNQKTGHLVGRLTKDLEE 123
            +  GL +   ++    LG  +  D+R   +  + K S  +F+  +TG ++ RLT D   
Sbjct: 75  AVALGLFSAARFYTVSWLGERVTADIRNAVYGRVLKQSPAFFETTQTGEVLSRLTADTTL 134

Query: 124 IGEVAHHGPEDLFIAIMTFIGAFLLMMSVNVQLALVTAAVVPVTAWVTSRYGGRMTQNFR 183
           +  V            +  +GA  +++  N  + +    ++ +    +  +G R+ +  R
Sbjct: 135 VQTVVGSSLSMGLRNAVMGVGALAVLVWTNPYVMVQVLGILVLVVLPSMWFGRRVRKLSR 194

Query: 184 ALYGRVGDFNARIEENVGGMRVVQAFANEDHERSLFEKDNQKYRRTKLDAYKIMAASTSL 243
           A   RV D +A   E +  + VVQ++  E  E S F    +   RT +   K  +   + 
Sbjct: 195 ASQDRVADSSAIAAEVLNAIPVVQSYTAEGREASRFNGSTENAFRTAVRRTKARSVLVAF 254

Query: 244 SYMSMRLTQMIVMICGAWFVLNGSLTEGGFVGFLLLVGVFFRPVEKINSVIETYPKGIAG 303
             ++     +  +  G   VL G +T G     ++ V +       +  V     +    
Sbjct: 255 IIIATSAALLWGLYQGTQAVLRGDITAGHLGQTVVYVAILASATAVLGEVYGDLLRAAGA 314

Query: 304 FRRFTELLDTAPDIVDA--PDAIDAPALSGAIEYRHVGFGYAE--GKRVLDNIDLKISAG 359
             R  ELL     I     P     PA   AI +  V F Y    G   L +  L ++ G
Sbjct: 315 TERLMELLHAPSAIFSPANPAVTPVPAAGSAIRFDAVTFHYPSRPGTPALRDFSLDVAPG 374

Query: 360 ETVAFVGPSGAGKTTLCSLLPRFYDVTSGSITIDGIDIRKMKLASLRNQIGIVQQDVFLF 419
           ETVA VG SGAGK+T+  LL R+YD  SG + +DG  +  + L+ LR +IG+V QD  +F
Sbjct: 375 ETVALVGSSGAGKSTVFQLLLRYYDPQSGRLILDGAPLASLALSDLRTRIGLVPQDAVIF 434

Query: 420 GGTIRENIEYGRLGASDEEIMDAARRARLDGVIEAMPLGLDTVIGERGVKLSGGQKQRLA 479
             +  ENI YGR  A+ EE+  AAR A     ++A+P G DT +GERGV+LSGGQ+QR+A
Sbjct: 435 STSAFENIRYGRPEATAEEVHAAARAAFAHDFLQALPEGYDTFLGERGVRLSGGQRQRIA 494

Query: 480 IARMFLKNPPILILDEATSALDTETERAIQQSLTELAKGRTTLVIAHRLATIRDASRIVV 539
           IAR  LKNPP+L+LDEATSALD E+ER +Q +L    +GRTTLVIAHRLAT++ A RI+V
Sbjct: 495 IARAILKNPPLLLLDEATSALDAESERMVQAALESAMEGRTTLVIAHRLATVQKADRIIV 554

Query: 540 VDQTGIAETGAHAELLAAKGHYSRLHEAQFS 570
           +D  GI E G HA L+A  G Y+RL   QF+
Sbjct: 555 LDHGGIVEQGTHAALVAQGGVYARLAALQFT 585