Pairwise Alignments

Query, 1272 a.a., ribonucleoside-diphosphate reductase 2 alpha chain from Agrobacterium fabrum C58

Subject, 810 a.a., Ribonucleotide reductase of class II (coenzyme B12-dependent) (EC 1.17.4.1) from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score = 97.4 bits (241), Expect = 4e-24
 Identities = 89/328 (27%), Positives = 133/328 (40%), Gaps = 59/328 (17%)

Query: 396 NSNNSVSLKDDFLRAVENDGNWNLT---------------ARKDGK-VMKTLKARDLWEK 439
           N N SV + D F+RA+ +D  W L                 R DG  V ++L AR+LW+ 
Sbjct: 208 NFNVSVGVSDAFMRALADDQPWELVHRARPGAALLAQGAHQRTDGLWVYRSLPARELWDT 267

Query: 440 ISHAAWASADPGLHFNTTMNDWHTSPAEGPIRASNPCSEYMFLDDTACNLASLNLLQFKD 499
           +  + +  A+PG+ F   +   +       I A+NPC E        C+L  + L +F  
Sbjct: 268 VMRSTYDFAEPGILFLDHIQQDNNLRYCESIEATNPCGEQPLPPYGCCDLGPVILPRFVR 327

Query: 500 -----AKTKRIDIADYEHAVRLWTVVLEVSVMMAQFPSRQIAERSYEYRTLGLGYANIGG 554
                      D   +E AV L    L+  + +  +P  Q    S   R +G+G+  +G 
Sbjct: 328 HPFGFGDLPSFDFEAFERAVALQVRALDNVLDVTYWPLPQQRAESAAKRRIGVGFTGMGN 387

Query: 555 LLMSSGIPYDSDEGRAIAGALTAIMTGVSYATSAEMAGELGPFPSFAPNRDNMLRVIRNH 614
            L    + YD  EGRA+A  +   M   +Y  S  +A E G FP F              
Sbjct: 388 ALAMLCVRYDRAEGRALAAQIAERMRDAAYTASVALAKEKGAFPKF-------------- 433

Query: 615 RRAAHGQSEGYEGLSVNPVALIHADCTDQDLVAHATAAWDKALELGEKHGYRNAQTTVIA 674
                  ++GY            A+ T    +  A  A  +A      HG RN+    IA
Sbjct: 434 ------DADGY-----------LAEGTFASRLPEALRAAIRA------HGIRNSHLLSIA 470

Query: 675 PTGTIGLVM-DCDTTGIEPDFALVKFKK 701
           PTGT+ L   D  + GIEP F+ +  +K
Sbjct: 471 PTGTVSLAFADNASNGIEPPFSWMYRRK 498



 Score = 53.9 bits (128), Expect = 6e-11
 Identities = 26/60 (43%), Positives = 34/60 (56%)

Query: 865 HIRMMAAAQPFISGAISKTINMPNDATVEDCGAAYMLSWKLALKANALYRDGSKLSQPLN 924
           H+ MM A QPF+  AISKT+N+P D   ED    Y  +W+  LK  A YR  + L   L+
Sbjct: 544 HLAMMEAVQPFVDTAISKTVNVPADYPYEDFKGLYQQAWRAQLKGLATYRPNAILGSVLD 603



 Score = 51.2 bits (121), Expect = 4e-10
 Identities = 34/105 (32%), Positives = 59/105 (56%), Gaps = 7/105 (6%)

Query: 199 CFIQSVEDDL--VNEGGIMDLW--VREA-RLFKYGSGTGSNFSYLRGEGEKLSGGGK-SS 252
           CF+Q V D +  +++GG   ++  +REA    + G G G +FS +R  G ++      +S
Sbjct: 97  CFVQPVGDCIQGLDDGGYAGIYEALREAAETMRRGGGVGYDFSRIRPRGAEVKTMASIAS 156

Query: 253 GLMSFLKIGDRAAGAIKSGGTTRRAAKMVVVDADHPDIEAYIDWK 297
           G  S++ + D++   ++S G  RR A+M V+  DHPD+  +I  K
Sbjct: 157 GPCSYINVFDQSCATVESAGA-RRGAQMGVLRIDHPDVIEFITAK 200



 Score = 28.9 bits (63), Expect = 0.002
 Identities = 10/30 (33%), Positives = 13/30 (43%)

Query: 1242 GNMCSECQNFTMVRNGTCEKCDTCGATSGC 1271
            G  C EC    ++R   C+ C  CG    C
Sbjct: 780  GKKCGECGAHAVIRKDGCDYCTQCGHLGVC 809