Pairwise Alignments

Query, 356 a.a., GGDEF family protein from Agrobacterium fabrum C58

Subject, 381 a.a., GGDEF domain protein from Pseudomonas putida KT2440

 Score =  106 bits (265), Expect = 9e-28
 Identities = 63/159 (39%), Positives = 91/159 (57%), Gaps = 8/159 (5%)

Query: 178 TDSLTRLSNRRAFDDRLASVYDSSIGL-QYTTLVLLDIDHFKRINDTFGHPVGDKILATV 236
           TD LT L+NRRAF D  ++ +        +  +++LD+DHFK+INDTFGH  GD++L  +
Sbjct: 214 TDELTGLNNRRAFFDNASAQHVRCRDAGTFMAVLMLDVDHFKQINDTFGHAAGDQVLQRI 273

Query: 237 ASVIRANVRKDGFVARSGGEEFAIILDGNTPEEVMVMCERIRLSLESTPFRNSRSGADYG 296
            + I A++R +    R GGEEFAI+L    P+  + + ER+R  +            D  
Sbjct: 274 GAAISASLRDNDIAGRLGGEEFAILLPNTPPDTAIEVAERLRALIAKLRVN------DEH 327

Query: 297 TVTISIGFASA-ARASNPSELYGHADTALYHAKETGRNR 334
            VT SIG A A A A+    L   AD+A+Y +K +GRNR
Sbjct: 328 PVTASIGLAFAKAPATELGALLSSADSAMYLSKVSGRNR 366