Pairwise Alignments

Query, 356 a.a., GGDEF family protein from Agrobacterium fabrum C58

Subject, 645 a.a., GGDEF domain protein from Pseudomonas putida KT2440

 Score =  113 bits (283), Expect = 1e-29
 Identities = 65/170 (38%), Positives = 93/170 (54%), Gaps = 4/170 (2%)

Query: 166 RLELDEYKRIANTDSLTRLSNRRAFDDRLA-SVYDSSIGLQYTTLVLLDIDHFKRINDTF 224
           R  L+E ++ A  D LT L NR A+ +R+   + D      +  + +LD+DHFKRIND +
Sbjct: 475 REHLEEQRQKALLDPLTGLPNRAAWSERVEREMLDWQENGGHLAMAILDLDHFKRINDNY 534

Query: 225 GHPVGDKILATVASVIRANVRKDGFVARSGGEEFAIILDGNTPEEVMVMCERIRLSLEST 284
           GH  GDK+L  VA  +R  +R   F+AR GGEEF ++L   TP     + E +R ++E+ 
Sbjct: 535 GHLAGDKVLKIVADQLRKRLRGRDFIARFGGEEFVMLLPQTTPAVAAQVAEVLRATVEAC 594

Query: 285 PFRNSRSGADYGTVTISIGFASAARASNPSELYGHADTALYHAKETGRNR 334
           PF       +   +T SIG  +        ++   AD ALY AKE GRNR
Sbjct: 595 PFHFK---GERVVITTSIGLGAFRSGERSDQVLKRADAALYRAKELGRNR 641