Pairwise Alignments

Query, 393 a.a., diaminopimelate decarboxylase from Agrobacterium fabrum C58

Subject, 415 a.a., diaminopimelate decarboxylase from Pseudomonas putida KT2440

 Score =  140 bits (352), Expect = 9e-38
 Identities = 106/396 (26%), Positives = 189/396 (47%), Gaps = 28/396 (7%)

Query: 4   IVAETGTPCFLYDNSAMRQAYRDLETALSGFADIY-YSVKANPLPAIISLFREEGAGAEI 62
           I    GTP ++Y  + +   YR    AL G   +  ++VKAN    ++++    GAG +I
Sbjct: 21  IAERYGTPTYVYSRAHIEAQYRSYADALQGTEHLVCFAVKANSNLGVLNVLARLGAGFDI 80

Query: 63  ASVGEYRAAVKAGVAPDNIIFAGPGKSMAELREVIEGGIGEIHIESAEEIARIEAI---- 118
            S GE    + AG   D ++F+G GK+  ++R  +E G+   ++ES +E+ R++ +    
Sbjct: 81  VSGGELERVLAAGGRADRVVFSGVGKTREDMRRALEVGVHCFNVESTDELERLQVVAAEM 140

Query: 119 NRPVKASIRINPVPDAQAGA---MRMGGKATAFGFDEEELENVLKLFANVRHIDLVGIHI 175
            +    S+R+N  PD  AG    +  G K   FG    + E +    A + ++++VG+  
Sbjct: 141 GKVAPVSLRVN--PDVDAGTHPYISTGLKENKFGIAIADAEAIYVRAAQLPNLEVVGVDC 198

Query: 176 YGGTQILDADMLVSQWRHAIALAGRMAQMLGKPLETIDLGGGLGIPYFAGETSLDLAKVA 235
           + G+Q+   +  +      + L  R+A+  G  L  +DLGGG+G+ Y   +      +VA
Sbjct: 199 HIGSQLTTVEPFLDALDRLLVLVDRLAE-CGIHLRHLDLGGGVGVRYRDEQP----PRVA 253

Query: 236 AAIPDLKALLKAHPLIADAHVIVEPGRFLAGPGGLYVVEVNSVKTSRGTTFVVTDGGMHH 295
             I  ++  +       D  ++ EPGR++    G+ +  V  +K +    F + D  M+ 
Sbjct: 254 DYIKAIRERVGER----DLALVFEPGRYIVANAGVLLTRVEYLKHTEHKDFAIIDAAMND 309

Query: 296 HLAASGNLGQIVKRNYPIVAPAMMQAAHDETATIVGPLCTPLDTLARNATLPKLNAGDLL 355
            +  +      + + +  V+    +A       +VGP+C   D L ++  L  L  GDLL
Sbjct: 310 LIRPA------LYQAWMGVSAVKPRAGEGRAYDLVGPICETGDFLGKDRVL-NLAEGDLL 362

Query: 356 AILQSGAYGASASPGGFLSHTVAKEVLVE-DGAFEV 390
           A+  +GAYG   S   + +     E+LV+ D AFEV
Sbjct: 363 AVESAGAYGFVMS-SNYNTRGRCAEILVDGDQAFEV 397