Pairwise Alignments

Query, 393 a.a., diaminopimelate decarboxylase from Agrobacterium fabrum C58

Subject, 415 a.a., type III PLP-dependent enzyme from Dickeya dianthicola ME23

 Score =  160 bits (405), Expect = 6e-44
 Identities = 125/390 (32%), Positives = 193/390 (49%), Gaps = 36/390 (9%)

Query: 13  FLYDNSAMRQAYRDLETALSGFADIYYSVKANPLPAIISLFREEGAGAEIASVGEYRAAV 72
           F+YD +A+R+   ++  AL    ++YY++KAN    I+        G EI+S GE  A V
Sbjct: 23  FVYDLTALRRHVSEVMAALPPGVELYYAIKANSEKPILDALAPLVHGFEISSGGEI-ARV 81

Query: 73  KAGVAPDNIIFAGPGKSMAELREVIEGGIGEIHIESAEEIARIE------AINRPVKASI 126
                    +F+GPGK  ++    +  G+  IH+ES  EIAR++       + +PV   I
Sbjct: 82  AGCATRKPFVFSGPGKLDSDFDLALAQGVEAIHVESRHEIARLQQRAKRHGVVQPV--FI 139

Query: 127 RINP-VPDAQAGAMRMGGKATAFGFDEEELENVLKLFANVRHIDLVGIHIYGGT-QILDA 184
           RINP +  +    + M G  T FG DE +L + ++   N  H+ L G H++  + Q++ A
Sbjct: 140 RINPELASSLTSKLAMAGTPTPFGMDEADLADAVRDVDNASHLQLKGFHVHAMSHQMVVA 199

Query: 185 ------DMLVSQWRHAIALAGRMAQMLGKPLETIDLGGGLGIPYFAGETSLDLAKVAAAI 238
                 D+ +++W    AL+        +P+  +++GGG+G+PY       D     A  
Sbjct: 200 RHQQLLDLYLTRWPQWKALSAHP-----QPITHLNVGGGIGVPYLT-PARFDWP---ALC 250

Query: 239 PDLKALLKAHPLIADAHVI-VEPGRFLAGPGGLYVVEVNSVKTSRGTTFVVTDGGMHHHL 297
             L+  L   P   DA VI  EPGRF++   G Y +EV   K S G  F+V  GG H   
Sbjct: 251 DYLRTRLAQQP---DAPVIRFEPGRFISAYCGYYAIEVLDKKRSHGKHFLVCRGGTHQFR 307

Query: 298 --AASGNLGQIVKRNYPIVAPAMMQAAHDETATIVGPLCTPLDTLARNATLPKLNAGDLL 355
             AA G+   ++  + P+ A        D T  +VG LCTP D L+R+  L  +N GDLL
Sbjct: 308 LPAAQGHDHPVI--HLPLTAAPTTGEMRDWT--VVGQLCTPKDVLSRDQRLTDVNIGDLL 363

Query: 356 AILQSGAYGASASPGGFLSHTVAKEVLVED 385
            +  +GAYG + S   FL H   ++  + D
Sbjct: 364 VLPLAGAYGYNISHADFLCHPRPEQYFLTD 393