Pairwise Alignments

Query, 579 a.a., hypothetical protein from Agrobacterium fabrum C58

Subject, 648 a.a., hypothetical protein from Pseudomonas simiae WCS417

 Score =  111 bits (278), Expect = 8e-29
 Identities = 154/657 (23%), Positives = 253/657 (38%), Gaps = 126/657 (19%)

Query: 9   PRFLKDKTGNIAISAGLTAPLFIGILALGVDYGYLTLQKRQLQQTADLAAISAAANA--- 65
           PR    + G I + A  T  + +  + L VD G L L+KR+LQ  AD +A+ AA+     
Sbjct: 3   PRLGSSQRGAIGLMAAGTLAVALVFMLLAVDSGRLYLEKRKLQSIADTSALEAASRGGLC 62

Query: 66  ---TDAEKAVQQYFALNGMDLGV-KTDQGLLTAKGLQPFDPLNEFASSKGYAEVIKGHYE 121
              T A    ++  A NG  +    + +GL    G          AS+     V      
Sbjct: 63  TPTTTANDYAKENAARNGFTVVAGDSSRGLAVTCGT--------LASNASNIRVF----- 109

Query: 122 PDATVPVGKRFVDNALPTNAIKVNIVEQGQIFFASAFTKPPKV--SAVGTASSQKIAAFS 179
              TV   K      + T  +  +I       F  A      V  +    AS+  +A  +
Sbjct: 110 ---TVDATKNDAVRVVATRTVMASIASGIWSLFGGAPVAAQTVLTATAVAASAPPVAQLT 166

Query: 180 VGSRLASLDEG---ILNSLLGGLLGTTVSLKLMDYQALLAADVNALKIVEALAIDLNLTA 236
           + + LAS++ G   +LN ++G LLG ++SL    +  LL  +VN L  ++ LAI+LN+ A
Sbjct: 167 IRTALASVNSGNSPLLNMVIGNLLGGSLSLTAAGWNGLLTTNVNLLSYLDQLAIELNVKA 226

Query: 237 GTYKDVLQTEISYGKFLD----VLTKTTGLQPAVVNILNTLQKTANKSNVKIKLEEILNL 292
           G Y  +L T +S  + LD    VL K   +  AV+N L T++  A  +       ++L +
Sbjct: 227 GDYDALLSTAVSASQLLDAAVKVLQKNGAVATAVINDLITVKAIAPNT-------QLLKV 279

Query: 293 GPFSDKLIGT-GENLKVTAGVFDLINAAAVAGNGGNQLALNLNANLLGLASVKATLAIGE 351
           G       GT    L  +  +F L+   A   +  + ++     N+  + +V     + E
Sbjct: 280 GDLLKVATGTPAAALNTSVQLFQLLETVAQLSSSKSAVSAAAQVNIPLVGTVSIQTKVIE 339

Query: 352 PP----VETPSLAVGG-------QGTIVRTAQTRLAVNV--------------------- 379
           PP    +  P+ A  G          +VRTAQ R  V +                     
Sbjct: 340 PPQLSAIGNPAKAKAGLLNNPPTDQIVVRTAQVRTLVKIDAPIIKAVSGVTSILTGLATP 399

Query: 380 ---------------VVDGLQAIAGLKV-------NLPLYVEVAHAEARLADIRCTGGGQ 417
                          VV G+  + G  V        L +Y+E A AE+ + D  C     
Sbjct: 400 VSKVVGGLLNLNLLDVVAGVVCLVGCNVADVDINQTLSIYIEAASAESHVTDFNCATPAT 459

Query: 418 GTVDVEVVPGVAEIALGNVDTSAFANFGKDPRVTKAAIVD----SALL------------ 461
            ++ V     +A + +G V+  +  +      V    ++D      LL            
Sbjct: 460 KSLTVRATTSLATLGVGYVEPVSAFSSSAAVNVQPVRLIDFGQRFCLLTLVCGPRTAGVG 519

Query: 462 -AINGSALINATNMTKTKLTFTQSDITQAKIKSVSTKDTVTTLVSSLLKNLNLDIRLLFL 520
             +N  AL      T T +    +DI  A I   S   T   L S  L N    +++ ++
Sbjct: 520 GGLNLRALSTVGAQTNTLVFSPVNDINAATIYK-SPPGTADILFS--LGNTLNGLQVTYV 576

Query: 521 -----------NIDLGGLAGIQAALANTLAVVTAPV-DQLLYNVLLVLGVKIGEADV 565
                            LA I +++   +  V AP+ D ++  +L  LG+ +G A+V
Sbjct: 577 PPSGSTPNPANGTVTNALATIISSVVGLVQNVLAPILDPIVNTLLSALGISLGNAEV 633