Pairwise Alignments

Query, 267 a.a., hypothetical protein from Agrobacterium fabrum C58

Subject, 258 a.a., putative membrane transporter protein YfcA from Acinetobacter radioresistens SK82

 Score =  146 bits (368), Expect = 5e-40
 Identities = 90/241 (37%), Positives = 131/241 (54%), Gaps = 8/241 (3%)

Query: 3   DIALNVFIVLFCVAIFAGFIDSIAGGGGLITIPAMM--IMGIAPLDTLGTNKLQAQFGSA 60
           DI + + +V F  A  AG ID+  GGGGLI IPA+M     + P    GTNKL +  G+A
Sbjct: 2   DIEIIISLVFF--AFCAGLIDAAVGGGGLIQIPALMGTFPHLPPATIFGTNKLASIAGTA 59

Query: 61  SATLAYARRGHVNLKEQLPMGLMAMAGGMLGALTAAFVPADLLRTIMPFLLITIALYFAL 120
           SA  +YARR     K  + +   A     +GA   + +P  +LR ++  +LI +A+Y  +
Sbjct: 60  SAAFSYARRVRFVWKLLVVIASCAFVSSFIGAACVSMIPVSVLRPLVLLMLIIMAVYTFM 119

Query: 121 KPQLSDIDSHRRITPFVFGLMVAP---LIGFYDGVFGPGAGSFYMLAFVALAGFGMLKAT 177
           K Q   + + R +    F LM A    LIGFYDG+FGPG GSF++  F+       L A+
Sbjct: 120 KKQFGQVHTERPVNSS-FLLMAALGSILIGFYDGIFGPGTGSFFIFFFIRFLSVDFLHAS 178

Query: 178 AHTKLLNLGSNFGGFVVFAMGGAVLWKLGLAMGLGQFIGAQVGSRFAMKNGAKIIRPLLV 237
           A +K+ NL +N      F   G VL+ +GL M L    G+ +G R A+K G+ +IR L +
Sbjct: 179 ALSKIGNLMTNLAALSFFIPTGHVLFGIGLGMALANIFGSLMGVRLALKYGSGLIRILFL 238

Query: 238 V 238
           +
Sbjct: 239 I 239



 Score = 26.2 bits (56), Expect = 7e-04
 Identities = 26/111 (23%), Positives = 44/111 (39%), Gaps = 4/111 (3%)

Query: 16  AIFAGFIDSI--AGGGGLITIPAMMIMGIAPLDTLGTNKLQAQFGSASATLAYARRGHVN 73
           +I  GF D I   G G       +  + +  L     +K+     + +A   +   GHV 
Sbjct: 144 SILIGFYDGIFGPGTGSFFIFFFIRFLSVDFLHASALSKIGNLMTNLAALSFFIPTGHVL 203

Query: 74  LKEQLPMGLMAMAGGMLGALTAAFVPADLLRTIMPFLLITIALYFALKPQL 124
               L M L  + G ++G   A    + L+R +  FL++   L   L  Q+
Sbjct: 204 FGIGLGMALANIFGSLMGVRLALKYGSGLIRIL--FLILVSILIIRLTYQM 252



 Score = 25.8 bits (55), Expect = 0.001
 Identities = 13/64 (20%), Positives = 29/64 (45%)

Query: 181 KLLNLGSNFGGFVVFAMGGAVLWKLGLAMGLGQFIGAQVGSRFAMKNGAKIIRPLLVVSC 240
           KL ++         +A     +WKL + +    F+ + +G+         ++RPL+++  
Sbjct: 51  KLASIAGTASAAFSYARRVRFVWKLLVVIASCAFVSSFIGAACVSMIPVSVLRPLVLLML 110

Query: 241 LAMA 244
           + MA
Sbjct: 111 IIMA 114