Pairwise Alignments

Query, 406 a.a., aminotransferase, class I from Agrobacterium fabrum C58

Subject, 407 a.a., N-succinyl-L,L-diaminopimelate aminotransferase alternative (EC 2.6.1.17) from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  148 bits (374), Expect = 2e-40
 Identities = 117/401 (29%), Positives = 183/401 (45%), Gaps = 22/401 (5%)

Query: 9   RLPQYVFEQVNRLKASARAAGA-DIIDLGMGNPDLPTPKAIVDKLCEVVQDPRTHRYSSS 67
           RL  Y FE++ +L A      A   I LG+G P    P  +   L   + D     Y ++
Sbjct: 7   RLQPYPFERLRKLFADVTPNPALRPISLGIGEPKHAAPDFLKQALAASL-DTGLSSYPAT 65

Query: 68  KGIPGLRRAQAGYYARRFGVKLNPDTQVVATLGSKEGFANMAQAI---TAPGDVILCPNP 124
            G P LR A A +  RR+GV L+P +Q++   GS+E     AQ +   T PG  ++ PNP
Sbjct: 66  AGTPALREACAAWVQRRYGVTLDPTSQLLPVNGSREALFAFAQTVIDPTRPGATVVMPNP 125

Query: 125 TYPIHAFGFLMAGGVIRSMNVEPDESFFGPLERAVRHSIPKPLALIVNYPSNPTAHVASL 184
            Y I+    L+ G     +  +P  +F    +        +   L V  P NP   V  L
Sbjct: 126 FYQIYEGAALLGGAEPYYVASDPARNFAAAWDSVPEAVWARTQLLFVCSPGNPAGAVMPL 185

Query: 185 DFYKDVIAFAKKHEIIVLSDLAYSEIYFDDNNPPPSV--LEVPGAIDV--AVEFTSMSKT 240
           D ++ +   + +H  ++ SD  YSEIYF D+ P   +   +  G  D    + FTS+SK 
Sbjct: 186 DEWQRLFELSDRHGFVIASDECYSEIYFRDDAPLGGLEAAQRLGRSDFRRLMMFTSLSKR 245

Query: 241 FSMPGWRMGFAVGNERLIAALTRVKSYLDYGAFTPIQVAATHALNGDGSDIAEVRSVYRR 300
            ++PG R GF  G+  LI      ++Y   GA +P+  AA+ A  GD   + + R  YR 
Sbjct: 246 SNVPGLRSGFVAGDASLIKPFLLYRTY-HGGAMSPVVQAASVAAWGDEDHVVDNRRQYRE 304

Query: 301 RRDVMVDTFGKAGFEVPPPAATMFAWAKIPEKFRHLGS-----LEFSKLLVEKADIAVAP 355
           +   +     +   +V  P A+ + WA +P  F    +       F++ L+ + ++ V P
Sbjct: 305 KFAQVTPLLAEV-LDVALPDASFYLWAAVPASFADAAAGLSADEAFARELLAQYNVTVLP 363

Query: 356 G------IGFGEMGDDYVRLALVENEHRIRQAARNLKRFLS 390
           G      +G    G   VR+ALV       +AA  ++ FLS
Sbjct: 364 GSYLAREVGGVNPGTGRVRMALVAEPAECLEAAGRIQAFLS 404