Pairwise Alignments

Query, 312 a.a., ABC transporter, substrate binding protein (amino acid) from Agrobacterium fabrum C58

Subject, 345 a.a., Glutamate/aspartate ABC transporter, substrate-binding protein GltI (TC 3.A.1.3.4) from Variovorax sp. SCN45

 Score =  352 bits (903), Expect = e-102
 Identities = 171/314 (54%), Positives = 218/314 (69%), Gaps = 4/314 (1%)

Query: 1   MKGKGFVTCGVSAGIPGFSNPDDKGEWSGIDVDYCRGIATAVFGDPSKAKFVALSSKDRF 60
           +K +G V CGV+ G+ GFS PD +G WSG+DVD CR IA AV GD  K  FV L+S+ RF
Sbjct: 34  VKQRGTVKCGVTNGVAGFSAPDTQGNWSGLDVDTCRAIAAAVLGDGKKVDFVPLNSQQRF 93

Query: 61  PALQSGEVDVLTRNTTWTISRDTSLGFNFRTVNYYDGQGFIAKKGLNVKSALELSGAAVC 120
            ALQ+GE+D+L RNTTWT++RD SLGFNF T+ YYDGQGF+  K L V SA +L  A +C
Sbjct: 94  SALQAGEIDILARNTTWTLTRDASLGFNFTTITYYDGQGFLVPKKLKVTSAKQLKNATIC 153

Query: 121 VQTGTTTELNLADYFKTNNLQYNPVVFEKESDATSAYDSGRCDVYTTDQSGLYAIRLK-L 179
            Q+GTT E N++DYF+   +    VVFE    +  A+ SGRC  +TTD S L  +R K  
Sbjct: 154 TQSGTTNEKNVSDYFRAQGIPVKTVVFESFEASFKAFFSGRCQAFTTDASALAGLRNKEA 213

Query: 180 KNPDDNIVLPEVISKEPLGPAVRQGDDQWFDIVTWVHYAMVNAEELGITSKNVDEQK-TS 238
            NPDD ++LPE+ISKEPL P VR+GDD+WF I  WV  A++ AEE G+T  N DE K  S
Sbjct: 214 PNPDDYVILPELISKEPLAPLVRRGDDEWFAIAKWVPNALIEAEEAGVTQANADELKANS 273

Query: 239 ANPDVKRLLGTEEGTKIGTDLGVGNDWAYNIVKLVGNYGEVFDRNVGAGSPLKIERGQNA 298
            +P  +RL+GT  G  +G  LG+  +W++  +K VGNYGE+F+RNVG  S LK+ RG N 
Sbjct: 274 KDPAQQRLVGT--GEDLGKLLGLDKEWSFRAIKAVGNYGEMFERNVGPKSVLKLPRGSNN 331

Query: 299 LWTKGGLQYAPPVR 312
           LW+KGGL YAPPVR
Sbjct: 332 LWSKGGLIYAPPVR 345