Pairwise Alignments

Query, 691 a.a., hypothetical protein from Agrobacterium fabrum C58

Subject, 717 a.a., conserved membrane protein of unknown function from Pseudomonas putida KT2440

 Score =  161 bits (407), Expect = 1e-43
 Identities = 174/713 (24%), Positives = 311/713 (43%), Gaps = 82/713 (11%)

Query: 12  ARLPALWLALCLFSSSTVFAQTP------TPANP-ANQTTEQKVDQLLNLMGQDDVRSLL 64
           A L  L+L L LF +    A  P       PA P A +   + +D+++  +  D  R+ L
Sbjct: 5   ALLRYLFLLLLLFIAPVQAAGLPGLLGGSAPAQPEATEPLGKSLDEVIKNLENDQQRAKL 64

Query: 65  AQRLSDTSDVAAPDDGNMS--VLDQWASKRREHLARLAGDAPAI---PGELSKAVTTLVN 119
              L    D       ++   VL        +   + +GDA        E+ +A   L  
Sbjct: 65  LADLKKLRDATRQSQPSVEQGVLGLIGGALHDFEKQFSGDASPFHRWAAEIEQAQAELAE 124

Query: 120 -EIEAYGLLRFLAHVALLFGVGITAGIATYWI-----TAARTASALPGNVAEFALATASR 173
             +  +     L   A +  V      A  W+          +  LP +   + L   + 
Sbjct: 125 LVVPVHQWPAILFGFAAVIAVWSVLAYAFNWVGHRVRLRFGLSEELPQHPRTWDLVRFAL 184

Query: 174 RLLPVVGYGLSATIMFFTIPLPPLLSAVLLPWLAVSVGLPLVKAVVDLLKRVINDGLNSR 233
           R L      L  T+ + +  LPP L   L   LA ++ +    + + ++   + DG +  
Sbjct: 185 RKLGPWLVALVFTV-YLSFVLPPSLGKSLAMVLAYALVVGTCFSAICVIAFSLLDGPHRH 243

Query: 234 RQF-----------WLTRSLDLLAVAMVCWAALRMLVSLGVTAAAVKLISYAMIAALFAL 282
           R             WL  S      AM   +  RMLV+LG T  A  L + A + A    
Sbjct: 244 RALHILRRQAFRPLWLIGSFAAFGEAM---SDPRMLVALG-THLAHTLATLANVIAALCT 299

Query: 283 GIYFI-WRQPQADANTER---RRSLDVAFTFYLFILFAVWIAGAGVFFWLGFFA------ 332
           G++ + +R+P A     +   RR      +  + IL + W   A +   +  FA      
Sbjct: 300 GLFILRFRRPIAHLIRNQPLSRRLTRRTLSDTIEILGSFWFIPALILVAISLFATFVSAG 359

Query: 333 -------------------LVLPGAVGTLGIAARKTATAMGGYSET--DFRPVLAQRSVR 371
                              +VL G V       ++ +     Y+E   +F  +L    + 
Sbjct: 360 DTSTALRQSLMCTVLVVVCMVLNGLVRRHAANPKRASKRQAVYTERLRNFGYLLVHLFIW 419

Query: 372 LLVLGAAV-IWLLFLIRNHPGALPGGSTVSAMFTGLLHGILVLLFADLFWVAIKTVISRR 430
           L+ +   + +W + +I    G    G  +S    GL   ++V   A L W+   T +   
Sbjct: 420 LVFIELGLRVWGVSMISFAEG---DGHDISLRLLGLAGTLIV---AWLVWILADTAVHHA 473

Query: 431 LEMNAPAASEHGVPASDDRLQTILPILRNMLGILISAVSVMTVLSELGVDIGPLLASAGI 490
           L       S  G+  ++ R QT++P++RN++ ++I  ++V+  L+ +G+++ PLLA AG+
Sbjct: 474 L-----VRSRRGL--ANARAQTMMPLIRNVMFVVIFIIAVIVALANMGMNVTPLLAGAGV 526

Query: 491 FGIAIGFGSQTLVKDIISGVFYMIDDAFRVGEYIQSGSYKGTVESFSIRSVKLRHHRGPI 550
            G+AIGFG+Q+LV D+I+G+F +I+D+  + +Y+  G + GTVE  +IR+V+LR   G +
Sbjct: 527 IGLAIGFGAQSLVADLITGLFIIIEDSLAIDDYVDVGGHLGTVEGLTIRTVRLRDIDGIV 586

Query: 551 YTVPFGSLGAVENMSRDWSIDKFLVTVAFDTDLTKVKSITREIGKALKDDPEFGPMLIET 610
           +T+PF  + +++N SR++    F V +    ++ +  S+ RE+G+ L++DP     +   
Sbjct: 587 HTIPFSEIKSIKNYSREFGYAIFRVAIPHSMNIDQAISLVREVGQKLRNDPLMRRNIWSP 646

Query: 611 VKLKGVEQFGDYGMTLGFGMMVKPNGQQSIIRRKAYSM-LKDAFEQNGIEFAT 662
           ++L+GVE F      L       P  Q  + R  A+++ LK   ++ G++ AT
Sbjct: 647 LELQGVESFESGSAILRARFKTAPIKQWEVSR--AFNLALKRQLDEAGLDLAT 697