Pairwise Alignments

Query, 540 a.a., cytochrome-c oxidase, FixN chain from Agrobacterium fabrum C58

Subject, 480 a.a., cytochrome c oxidase subunit I, cbb3-type from Pseudomonas putida KT2440

 Score =  612 bits (1577), Expect = e-179
 Identities = 286/453 (63%), Positives = 351/453 (77%), Gaps = 3/453 (0%)

Query: 68  YFDEVVKYGVIATVFWGVVGFLVGVVVALQLAFPDLNI-APYFNFGRMRPLHTSAVIFAF 126
           Y  +VV+   I TV WG++G  +GV +A QL +P LN+  P+ +FGR+RPLHT+ VIFAF
Sbjct: 10  YNYKVVRQFAIMTVVWGILGMGLGVFIASQLVWPQLNLDLPWTSFGRLRPLHTNLVIFAF 69

Query: 127 GGNALIATSFYVVQRTCRARLFGGNLGWFVFWGYNLFIIMAATGYLLGITQGREYAEPEW 186
           GG AL  TS+YVVQRTC+ RL   ++  F FWG+   I+ A     +G T  +EYAE EW
Sbjct: 70  GGCALFGTSYYVVQRTCQTRLISDSMAAFTFWGWQAVIVGALITLPMGYTTTKEYAELEW 129

Query: 187 YVDIWLTIVWVAYLATFLGTILTRKEPHIYVANWFYLSFIVTIAMLHIVNNLAVPVSFLG 246
            + I L IVWV Y   F GTI+ RK  HIYV NWFY +FIV  AMLHIVN++++PVS   
Sbjct: 130 PLAILLAIVWVTYGLVFFGTIVKRKTKHIYVGNWFYGAFIVVTAMLHIVNHISLPVSLF- 188

Query: 247 VKSYSAFSGVQDALTQWWYGHNAVGFFLTAGFLGMMYYFIPKQVNRPVYSYRLSIIHFWA 306
            KSYSA+SG  DA+ QWWYGHNAVGFFLT GFLGMMYYF+PKQ  RP+YSYRLSI+HFWA
Sbjct: 189 -KSYSAYSGATDAMIQWWYGHNAVGFFLTTGFLGMMYYFVPKQAERPIYSYRLSIVHFWA 247

Query: 307 LIFMYIWAGPHHLHYTALPDWAQTLGMVFSIMLWMPSWGGMINGLMTLSGAWDKIRTDPI 366
           LI +YIWAGPHHLHYTALPDWAQ+LGMV SI+L  PSWGGMING+MTLSGAW K+RTDPI
Sbjct: 248 LITLYIWAGPHHLHYTALPDWAQSLGMVMSIILLAPSWGGMINGMMTLSGAWHKLRTDPI 307

Query: 367 VRMMVMAVAFYGMATFEGPMMSIKAVNSLSHYTDWTIGHVHSGALGWNGMITFGAIYYLT 426
           +R +V+++AFYGM+TFEGPMM+IK VNSLSHYTDWTIGHVH+GALGW  MI+ GA+Y++ 
Sbjct: 308 LRFLVVSLAFYGMSTFEGPMMAIKTVNSLSHYTDWTIGHVHAGALGWVAMISIGAVYHMI 367

Query: 427 PKLWGRDRLYSLQLVNWHFWLATLGIVVYAAVMWVAGIQQALMWREYDSQGFLVYSFAES 486
           PKL+GR++++S+ L+N HFWLAT+G V+Y A MWV GI Q LMWR  +  G L YSF E+
Sbjct: 368 PKLYGREQMHSIGLINAHFWLATIGTVLYIASMWVNGITQGLMWRAINDDGTLTYSFVEA 427

Query: 487 VAALFPYYVMRALGGLMFLSGALIMAYNVTMTI 519
           + A  P Y++RALGG  F SG L+MAYNV  T+
Sbjct: 428 LQASHPGYIVRALGGAFFASGMLLMAYNVFRTV 460