Pairwise Alignments

Query, 540 a.a., cytochrome-c oxidase, FixN chain from Agrobacterium fabrum C58

Subject, 529 a.a., Cytochrome c oxidase subunit 1 from Pseudomonas putida KT2440

 Score = 79.0 bits (193), Expect = 4e-19
 Identities = 99/450 (22%), Positives = 182/450 (40%), Gaps = 65/450 (14%)

Query: 25  HDSLFAAHMWVLF--FTLVVSTVLLLRRVSFAP----VDPAARARRNSEYFDEVVKYGVI 78
           H  +   ++W  F  F L  S  +++R   F P    V+PA        +F+++     +
Sbjct: 31  HKDIGTMYLWFSFIMFLLGGSFAMVIRAELFQPGLQIVEPA--------FFNQMTTMHGL 82

Query: 79  ATVFWGVVGFLVGV---VVALQLAFPDLNIAPYFNFGR-MRP---LHTSAVIFAFGGNAL 131
             VF  V+   VG+   ++ L +  PD+ +    NF   + P   L   + +F+ GG   
Sbjct: 83  IMVFGAVMPAFVGLANWMIPLMIGAPDMALPRMNNFSFWLLPAAFLLLVSTLFSPGGGPN 142

Query: 132 IATSFYVVQRTCRARLFGGNLGWFVFWGYNLFIIMAATGYLLGITQGREYAEPEWYVDIW 191
              +FY    T  A     ++ +F+F             +L+GI+             I 
Sbjct: 143 FGWTFYAPLSTTYAP---ASVTFFIF-----------AIHLMGISS------------IM 176

Query: 192 LTIVWVAYLATFLGTILTRKEPHIYVANWFYLSFIVTIAM---LHIVNNLAVPVSFLGVK 248
             I  +A +       +T  +  ++V  W   +F++   M     +V  + + + F G  
Sbjct: 177 GAINVIATILNLRAPGMTLMKMPLFVWTWLITAFLLIAVMPVLAGVVTMMLMDIHF-GTS 235

Query: 249 SYSAFSGVQDALTQ---WWYGHNAVGFFLTAGFLGMMYYFIPKQVNRPVYSYRLSIIHFW 305
            +SA  G    L Q   W++GH  V   +   F G +   IP    +P++ Y   +    
Sbjct: 236 FFSAAGGGDPVLFQHVFWFFGHPEVYIMILPAF-GAVSSIIPAFSRKPLFGYTSMVYATG 294

Query: 306 ALIFMYIWAGPHHLHYTALPDWAQTLGMVFSIMLWMPSWGGMINGLMTLSGAWDKIRTDP 365
           A+ F+      HH+    +P   +   M  ++++ +P+   + N + T+   W+   T  
Sbjct: 295 AIAFLSFIVWAHHMFVVGIPVVGELFFMYATMLIAVPTGVKVFNWVSTM---WEGSLT-- 349

Query: 366 IVRMMVMAVAF---YGMATFEGPMMSIKAVNSLSHYTDWTIGHVHSGALGWNGMITFGAI 422
               M+ A+AF   + +  F G M++I   +   H T + + H H   +       F + 
Sbjct: 350 FETPMLFAIAFVILFTIGGFSGLMLAIAPADFQYHDTYFVVAHFHYVLVPGAIFGIFASA 409

Query: 423 YYLTPKLWGRDRLYSLQLVNWHFWLATLGI 452
           YY  PK  G   +Y   L   HFWL+ +G+
Sbjct: 410 YYWLPKWTG--HMYDETLGKLHFWLSFVGM 437