Pairwise Alignments

Query, 287 a.a., cytochrome-c oxidase, FixP chain from Agrobacterium fabrum C58

Subject, 417 a.a., gluconate 2-dehydrogenase cytochrome c subunit from Pseudomonas putida KT2440

 Score = 43.5 bits (101), Expect = 8e-09
 Identities = 50/176 (28%), Positives = 73/176 (41%), Gaps = 50/176 (28%)

Query: 139 NDDDWMWGGSVDDIYTTVKHGIRFADDADTRASEMPAFGDILKSDEIRAVAAYVVSLTGT 198
           +D   ++GG  D     V+H ++   DAD                 + A+A Y+ +L   
Sbjct: 252 SDRSAVFGGMSD----VVEHSMQHMSDAD-----------------LTAIARYLKTLP-- 288

Query: 199 PSNP-------------AL-----VEPGKQLFADNCASCHGEDAKG-NREFGA------P 233
           PSNP             AL      +PG  ++ DNCA+CH  D +G  R F A       
Sbjct: 289 PSNPDDQLHVYDKQVADALWKGDDSKPGAAVYIDNCAACHRTDGQGYTRVFPALAGNPVV 348

Query: 234 NLADAIWLKAHGEEG--IVAQIRSPKHGVMPAWGERLGDTTVKQLAIFVHSLGGGE 287
             ADA  L      G  + A   +P +  MPA+G RL D  V ++  F+ S  G +
Sbjct: 349 QTADATSLIHVVLAGGTVPATHSAPSNFTMPAFGWRLSDQEVAEVVNFIRSSWGNQ 404



 Score = 27.7 bits (60), Expect = 5e-04
 Identities = 26/104 (25%), Positives = 38/104 (36%), Gaps = 8/104 (7%)

Query: 113 GAAAFKVNCIQCHGSGAEGGQGYPNL-----NDDDWMWGGSVDDIYTTVKHGIRFADDAD 167
           GAA +  NC  CH +    GQGY  +      +       +   I+  +  G   A  + 
Sbjct: 316 GAAVYIDNCAACHRT---DGQGYTRVFPALAGNPVVQTADATSLIHVVLAGGTVPATHSA 372

Query: 168 TRASEMPAFGDILKSDEIRAVAAYVVSLTGTPSNPALVEPGKQL 211
                MPAFG  L   E+  V  ++ S  G   +       K L
Sbjct: 373 PSNFTMPAFGWRLSDQEVAEVVNFIRSSWGNQGSAVTAGDVKSL 416