Pairwise Alignments

Query, 287 a.a., cytochrome-c oxidase, FixP chain from Agrobacterium fabrum C58

Subject, 636 a.a., putative cytochrome c family protein from Pseudomonas putida KT2440

 Score = 42.0 bits (97), Expect = 4e-08
 Identities = 33/95 (34%), Positives = 42/95 (44%), Gaps = 16/95 (16%)

Query: 113 GAAAFKVNCIQCHGSGAEG----GQGYP----NLNDDDWMWGGSVDDIYTTVKHGIRFAD 164
           GAA +  NC  CHG    G    G G      NL D   +   S+ D+Y T+  GI    
Sbjct: 140 GAALYAQNCSICHGDTGAGDGPAGVGLEPAPANLRDVSRLDQLSLFDLYNTLALGID--- 196

Query: 165 DADTRASEMPAFGDILKSDEIRAVAAYVVSLTGTP 199
                 +EMP+F D L   +   VAAY+ S T  P
Sbjct: 197 -----GTEMPSFADQLDDRQRWDVAAYIASFTAKP 226



 Score = 28.1 bits (61), Expect = 5e-04
 Identities = 20/80 (25%), Positives = 33/80 (41%), Gaps = 10/80 (12%)

Query: 156 VKHGIRFADDADTRASEMPAFGDILKSDEIRAVAAYVVS----LTGTPSNPALVEPGKQL 211
           ++ G++    A  +  E  A     +    R   AY +S    +T  P+       G  L
Sbjct: 90  LEQGVQALRQAIDQRQEGTAVAKQARQLGARLAVAYEISQAPVITPDPAR------GAAL 143

Query: 212 FADNCASCHGEDAKGNREFG 231
           +A NC+ CHG+   G+   G
Sbjct: 144 YAQNCSICHGDTGAGDGPAG 163