Pairwise Alignments

Query, 336 a.a., hypothetical protein from Agrobacterium fabrum C58

Subject, 324 a.a., putative tRNA-dihydrouridine synthase from Alteromonas macleodii MIT1002

 Score =  298 bits (763), Expect = 1e-85
 Identities = 151/319 (47%), Positives = 210/319 (65%), Gaps = 3/319 (0%)

Query: 18  MIDWTDTRCRFLHRQLSKRALLFTEMIVADAIIHGQREKLLGYHPQEHPVALQLGGSNPA 77
           M+DWTD  CR+  R +SK  LL+TEM+   AII+G+ +  LGY+ +EHPVA+QLGGS+P+
Sbjct: 1   MLDWTDRHCRYFLRLMSKHTLLYTEMVTTGAIIYGKGD-YLGYNQEEHPVAVQLGGSDPS 59

Query: 78  KLAEAVRIAGDYGYDEINLNVGCPSDRVQSGTFGACLMREPEVVAQCISAMKAVAAVPVT 137
            +A+   ++   GYDE+N+NVGCPSDRV++G+FGACLM +PEVVA C+ AM+A   +PVT
Sbjct: 60  DMAKCAELSQARGYDEVNINVGCPSDRVKNGSFGACLMAQPEVVASCVKAMQAAVDIPVT 119

Query: 138 VKCRIGVDDQEPETVLPDFLARVVAAGADAVWVHARKAWLQGLSPKENREVPPLDYDLVY 197
           VKCRIG+DD + +     F+  V  AG D   VHARKAWLQGLSPKENRE+PPL+Y  V+
Sbjct: 120 VKCRIGIDDMDEDEDFARFIDTVADAGCDTFIVHARKAWLQGLSPKENREIPPLNYPRVH 179

Query: 198 RMKRDNPDVFIGINGGIADLDQAGEHLKYVDGVMLGRAAYHNTSILADVDHRIHGE-EAL 256
           R+K+  P++ I INGG+  L++  + L+ VDGVM+GR  Y N  I+A VD  I G+ EA 
Sbjct: 180 RLKQARPELSISINGGVKTLEETQQQLELVDGVMVGREVYANPYIMATVDKEIFGDTEAQ 239

Query: 257 QYDWMALRDTMMAYAADYIATGGRLNHVTRHMVGLFQGMPGARRFRQILSSDATRPGAGP 316
                 +   M  Y         +  H  RH++GL+QG  G R +R+ LS + T     P
Sbjct: 240 SMSRREIVLKMQQYIERQDDPYFKPWHAARHILGLYQGQAGGRIWRRYLSQNGTGKNPDP 299

Query: 317 EVIEAAFAAIDFNPMKELA 335
            ++  A  A++ +  KE+A
Sbjct: 300 NLLLNALDAVE-SAQKEVA 317