Pairwise Alignments

Query, 906 a.a., DNA gyrase subunit A from Agrobacterium fabrum C58

Subject, 752 a.a., DNA topoisomerase IV subunit A from Pseudomonas putida KT2440

 Score =  370 bits (950), Expect = e-106
 Identities = 247/726 (34%), Positives = 395/726 (54%), Gaps = 65/726 (8%)

Query: 2   QRSYLDYAMSVIVSRALPDVRDGLKPVHRRILYGMSELGIDWNKKYVKCARVTGDVMGKF 61
           +++YL+Y+M VI+ RALP + DGLKPV RRI+Y MSELG+D + K+ K AR  GDV+GKF
Sbjct: 22  EQAYLNYSMYVIMDRALPHIGDGLKPVQRRIVYAMSELGLDADAKHKKSARTVGDVLGKF 81

Query: 62  HPHGNSAIYDALARMAQDWSLRLPLIDGQGNFGSIDGDPP--AAERYTECRLEKAAHSLL 119
           HPHG+SA Y+A+  MAQ +S R  L+DGQGN+G+ D DP   AA RYTE RL + A  LL
Sbjct: 82  HPHGDSACYEAMVLMAQPFSYRYTLVDGQGNWGAPD-DPKSFAAMRYTEARLSRYAEVLL 140

Query: 120 DDLDKETVDFRDNYDGTLQEPVVVPAKFPNLLVNGAGGIAVGMATNIPPHNLSEVIDGCV 179
            ++ + TVD+  N+DGTLQEP V+PA+ PN+L+NG  GIAVGMAT++PPHNL EV   CV
Sbjct: 141 SEVGQGTVDWVPNFDGTLQEPAVLPARLPNILLNGTTGIAVGMATDVPPHNLREVASACV 200

Query: 180 ALIENPAIELPEMMQIIPGPDFPTGA-LIMGRSGIRSAYETGRGSVIMRGVATIEPMRGD 238
            L++ P   + ++ + I GPD+PT A ++  R+ I   YE+GRGS+ MR V  +E   GD
Sbjct: 201 RLLDEPKATIEQLCEHIQGPDYPTEAEIVTPRAEILKMYESGRGSIRMRAVYRVED--GD 258

Query: 239 REQIIITEVPYQVNKASMIEKMAELVKEKRIEGISDLRDESDRQGYRVVIELKRDANAEV 298
              I++T +P+QV+ A ++E++A  ++ K++  ++DLRDESD +    ++ + R    +V
Sbjct: 259 ---IVVTALPHQVSGAKVLEQIAAQMQAKKLPMVADLRDESDHENPCRIVIIPRSNRVDV 315

Query: 299 --ILNQLYRYTPLQTSFGCNMVALN-GGKPEQMTLLDMLRAFVSFREDVVSRRTKYLLRK 355
             ++  L+  T L++++  N+  +   G+P+   L  +L  ++ FR + V RR ++ L K
Sbjct: 316 DELMQHLFATTDLESTYRVNVNIIGLDGRPQLKNLRTLLVEWLEFRTNTVRRRLQHRLDK 375

Query: 356 ARDRAHVLVGLAISVANIDEVIRVIRHAPDPASAREQLMTRRWPAQDVESLIRLIDDPRH 415
              R H+L GL  +  N+DEVI +IR             T  +P Q   +LI        
Sbjct: 376 VEKRLHLLDGLLTAFLNLDEVIHIIR-------------TEEYPKQ---ALIE------- 412

Query: 416 RINEDGTYNLSEEQARAILELRLARLTALGRDEIGDELNKIGAEISEYLDILSSRVRIQQ 475
                  + L+E QA  ILE RL +L  L   +I  E +++  E ++   +L S  ++++
Sbjct: 413 ------RFELTEIQADYILETRLRQLARLEEMKIRGEQDELLKEQAKLQALLGSEAKLRK 466

Query: 476 IVKDELVSIRDEFGTPRRSQIV--EGGPDMDDEDLIAREDMVVTVSHLGYIKRVPLTTYR 533
           +V+ EL+   + +G  RRS IV       + + +L+  E + V +S  G++        R
Sbjct: 467 LVRSELIKDAETYGDDRRSPIVARAEAKALSENELMPTEPVTVVLSEKGWV--------R 518

Query: 534 AQRRGGKGRSGMATRDEDFVNRLFVANTHTPVLFFSSRGIVYKEKVWRLPIGTPQSKGKA 593
             +      +G++ +  D         ++   +   S G  Y      LP  + + +G+ 
Sbjct: 519 CAKGHDIDATGLSYKAGDGFKAAAAGRSNQFAVLIDSTGRSYSLAAHSLP--SARGQGEP 576

Query: 594 LINMLPLEPGERITTIMPLPEDETAWETLDVMFSTTRGTVRRNKLGDFVQVNRNGKIAMK 653
           L   L   PG     ++ LP+D+  +    V      G V + +  D    N+ GK  + 
Sbjct: 577 LTGRLTPPPGATFECVL-LPDDDALYV---VASDAGYGFVVKGE--DLQAKNKAGKGLLS 630

Query: 654 LDEEGDEILSVETCTDR--DDVLLTTALGQCIRFPVDDVRVFA---GRNSVGVRGINMAE 708
           L   G ++++     DR  D +   T  G+ + F V D+       G   +GV G  +A 
Sbjct: 631 L-PNGAKVMTPRPVADREQDWLAAVTTEGRLLVFKVSDLPQLGKGKGNKIIGVPGDRVAS 689

Query: 709 GDRIIS 714
            +  ++
Sbjct: 690 REEFVT 695