Pairwise Alignments

Query, 499 a.a., penicillin-binding protein from Agrobacterium fabrum C58

Subject, 389 a.a., D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4) from Variovorax sp. SCN45

 Score =  151 bits (382), Expect = 3e-41
 Identities = 107/340 (31%), Positives = 170/340 (50%), Gaps = 21/340 (6%)

Query: 26  VRFVALTLAAA--FIAATSVQTAKADPKYAGIVIDAKSGKVLYGEDPDGLRYPASLTKMM 83
           +R + +T AA+  FIAA  V         + +++D  + ++L  +D D    PASLTK+M
Sbjct: 8   LRALVITAAASISFIAAAQVPAPPEIAARSYLLLDVTANQILAQKDIDSPVEPASLTKLM 67

Query: 84  TLYLTFEALNSGRISLDSRVTVSANAAKEPPSKLGVRAGGSVTVEQAILALVTRSANDMA 143
           T Y+ F+AL + +ISL   + VS  A K P S++ +     V VE  I  L+ +S ND  
Sbjct: 68  TAYVVFDALRTKKISLTQTLPVSQRAWKMPGSRMFIDPKMQVPVEDLIKGLIVQSGNDAT 127

Query: 144 TALGEHLGGSEDRFARMMTAKARALGMTRTTYRNANGLPNTAQMTTARDQARLGIALRQH 203
            AL E +GG+ + F  MM A+A+ LGM  TTY+N  GL      TTARD + L   L + 
Sbjct: 128 VALAEGVGGTVEHFVEMMNAQAKVLGMKNTTYKNPEGLTTPGHTTTARDLSILATRLVRD 187

Query: 204 FPQYYGYFSTRTFNF-GKQVIG--NHNRLVGTVKGVDGIKTGYTRAAGSNLATSAQLD-- 258
           FP+   Y++ + + + G       N N L+     VDG+KTG+T AAG  +  +A+ D  
Sbjct: 188 FPEEAKYYAIKKYRYPGTPSTNDTNRNMLLFRDPTVDGLKTGHTDAAGYCMIATAKRDFP 247

Query: 259 ----GRSIVAVVLGGRSSAARDATMRKLV--------ATYLPQASRGGNSNLIAQTRSGP 306
               GR ++++VLG  S   R    +KL+        A  L  A +   +  + + +   
Sbjct: 248 NLTGGRRLLSIVLGATSETVRANESQKLLNWGYTAYDAVRLFDAGQPAATPAVWKGKDNT 307

Query: 307 VE--EPVTVAAAAPYPSVAVAATDSGLPNAGPVPQTRYEE 344
           ++   P  +  A P  S +   T    P+    P T++++
Sbjct: 308 LKLGRPEAIVVAVPAGSASKIKTQVSRPDPLVAPFTKFQQ 347