Pairwise Alignments

Query, 390 a.a., penicillin binding protein from Agrobacterium fabrum C58

Subject, 387 a.a., D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4) from Sphingobium sp. HT1-2

 Score =  195 bits (495), Expect = 2e-54
 Identities = 115/382 (30%), Positives = 186/382 (48%), Gaps = 8/382 (2%)

Query: 10  RSAIVVAAFAFFSAGAAQSQTAPFIAKAEQAYMIDAETGTVLLSQNEDQSFPPASLAKLM 69
           +  +    F    A    +   P+ ++A  AY+ D  +G VL  +  +   PPAS+AK+M
Sbjct: 2   KKTVAATLFVGLLAQPLVAAAPPYTSEAPIAYLKDLSSGAVLYDKGGETRMPPASMAKMM 61

Query: 70  TVEVVLDALSKGQVTPETAYPVSEYAWRTGGAPSRTSTMFAALKSSVGINDLLTGIIVQN 129
           T  V    + KG++  +T + V    W+    P   STMF ++   V + +LL GI+  +
Sbjct: 62  TAHVAFRLIQKGELKLDTKFTVRPETWQQWHGPKAGSTMFLSVGEQVSVENLLHGIVTLS 121

Query: 130 ANDGCIIVAEGMAGSDAAFAKRMTARAGELGMNRSIFSNSTGLPDPG-NQTTARDMVRLA 188
            ND C+++AEG+AG++ AF   M   A  +G+  S F  S G PD G    TA D+ +LA
Sbjct: 122 GNDACVVLAEGIAGTEQAFVALMNEEAKRMGLKNSHFGTSNGWPDEGVTYVTAEDLAKLA 181

Query: 189 QHLHDTYPDRYALF-TKPDFEWNR------IFQRNKNTLLMPGSGIDGLGLGFAEGSGFA 241
           +      PD Y  F     F W +      I Q N+N +L   +G DGL  G  E +GF 
Sbjct: 182 EATIVETPDLYKKFYATRSFTWGKTMGGSDIAQANRNPILGKIAGADGLKTGHTEEAGFG 241

Query: 242 AVVSAEREGRRVYLALAGIADDKTRQEEARRVVDWGLTAFEKRHLFSKDEAVGAVSVYGG 301
              SAE++GRR+ + +AG+     R  E+ R +DWG  A++ + LF K + V   +V  G
Sbjct: 242 FTGSAEQDGRRLVMVVAGLTSFNGRITESVRFMDWGFRAWKAQPLFKKGQTVETAAVQLG 301

Query: 302 DVSHIDLSPKEDVSVLVPVNNPDRISGRIVYRWPLNAPLDVGANAGTLKIFSGERLLREV 361
             S + L   ++++V +P      +  ++VY  P+ AP+  G     L + + +   + +
Sbjct: 302 SASTVSLVAPQNMAVTMPRTASANVKVKVVYTGPIKAPIAKGQQIAQLIVQTPDTPPQVL 361

Query: 362 PLYTKTAVGKGSLTQNATGALK 383
           PL     V +  +       LK
Sbjct: 362 PLVAGEDVAEAGIFGRLWNGLK 383