Pairwise Alignments

Query, 390 a.a., penicillin binding protein from Agrobacterium fabrum C58

Subject, 356 a.a., D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4) from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  164 bits (415), Expect = 4e-45
 Identities = 109/333 (32%), Positives = 157/333 (47%), Gaps = 3/333 (0%)

Query: 43  IDAETGTVLLSQNEDQSFPPASLAKLMTVEVVLDALSKGQVTPETAYPVSEYAWRTGGAP 102
           +D  +G VL   N D+   PASL K+MT  VV  AL  G++       V + AW TG   
Sbjct: 1   MDYASGKVLAEGNADEKLDPASLTKIMTSYVVGQALKAGKIKLTDMVTVGKDAWATGNPA 60

Query: 103 SR-TSTMFAALKSSVGINDLLTGIIVQNANDGCIIVAEGMAGSDAAFAKRMTARAGELGM 161
            R +S MF      V + DL  GII+Q+ ND CI +A+ +AGS  +F   M A A  LG+
Sbjct: 61  LRGSSVMFLKPGDQVSVADLNKGIIIQSGNDACIALADYVAGSQESFIGLMNAYAKRLGL 120

Query: 162 NRSIFSNSTGLPDPGNQTTARDMVRLAQHLHDTYPDRYALFTKPDFEWNRIFQRNKNTLL 221
             + F    GL  PG  +TARDM  L + L    PD YA+  + +F +N I Q N+N LL
Sbjct: 121 TNTTFQTVHGLDAPGQFSTARDMALLGKALIHDVPDEYAIHKEKEFTFNNIRQPNRNRLL 180

Query: 222 MPGS-GIDGLGLGFAEGSGFAAVVSAEREGRRVYLALAGIADDKTRQEEARRVVDWGLTA 280
              +  +DG+  G   G+G+  V SA +   R+   + G   D+ R  E+ +++ WG   
Sbjct: 181 WSTNLHVDGMKTGTTAGAGYNLVASATQGDMRLISVVLGAKTDRIRFNESEKLLTWGFRF 240

Query: 281 FEKRHLFSKDEAVGAVSVYGGDVSHIDLSPKEDVSVLVPVNNPDRISGRIVYRWP-LNAP 339
           FE       D       V+ GD   ++L   +  SV +P      +        P L AP
Sbjct: 241 FETVTPIKPDATFVTQRVWFGDKHEVNLGAGDAGSVTIPRGQLKNLKASFTLNEPQLTAP 300

Query: 340 LDVGANAGTLKIFSGERLLREVPLYTKTAVGKG 372
           L  G   GT+      + + + PL     V +G
Sbjct: 301 LKKGQVVGTIDFQLNGKSIEQRPLMVMENVEEG 333