Pairwise Alignments

Query, 390 a.a., penicillin binding protein from Agrobacterium fabrum C58

Subject, 402 a.a., D-alanyl-D-alanine carboxypeptidase from Dickeya dianthicola ME23

 Score =  169 bits (427), Expect = 2e-46
 Identities = 113/348 (32%), Positives = 166/348 (47%), Gaps = 6/348 (1%)

Query: 8   SYRSAIVVAAFAFFSAGA---AQSQTAPFIAKAEQAYMIDAETGTVLLSQNEDQSFPPAS 64
           S+   +VVAA A  +      A+    P   +A+   +ID+ +G VL   N D    PAS
Sbjct: 9   SWGRVVVVAATALMTVSPVLRAEQMPPPPQIEAKAFVLIDSASGRVLAESNADARLDPAS 68

Query: 65  LAKLMTVEVVLDALSKGQVTPETAYPVSEYAWRTGGAPSR-TSTMFAALKSSVGINDLLT 123
           L K+M+  V+  A+  G++TPE    V + AW TG    R +S MF      + ++DL  
Sbjct: 69  LTKIMSSYVIGQAIKVGKITPEDKVTVGKDAWATGNPALRGSSLMFLKPGDQIPVSDLNK 128

Query: 124 GIIVQNANDGCIIVAEGMAGSDAAFAKRMTARAGELGMNRSIFSNSTGLPDPGNQTTARD 183
           G+++Q+ ND  I +A+ +AGS  AF   M   A  LG+  + F    GL   G  +TARD
Sbjct: 129 GMVIQSGNDASIALADYVAGSQDAFVSLMNQYAATLGLANTHFLTVHGLDTLGQYSTARD 188

Query: 184 MVRLAQHLHDTYPDRYALFTKPDFEWNRIFQRNKNTLLMPGS-GIDGLGLGFAEGSGFAA 242
           M RL Q L    P  YAL ++ +F +N I Q N+N LL  G+  +DG+  G+  G+G + 
Sbjct: 189 MARLTQALIRDVPGEYALHSEKEFTFNNIRQPNRNRLLWSGNLRVDGVKTGYTGGAGHSL 248

Query: 243 VVSAEREGRRVYLALAGIADDKTRQEEARRVVDWGLTAFEKRHLFSKDEAVGAVSVYGGD 302
           V SA     R+   + G   D  R  E+ +++ WG   FE       D       V+ G 
Sbjct: 249 VASAVDSDMRLISVVLGAPSDAVRFRESEKLLTWGFRFFETVTPVRSDTPFTTPRVWFGT 308

Query: 303 VSHIDLSPKEDVSVLVPVNNPDRISGRIVYRWP-LNAPLDVGANAGTL 349
                LS  +D ++ VP      +        P L APL  G   GT+
Sbjct: 309 EKQARLSVAQDAALTVPKGQMKNLKASFTLAQPQLTAPLKKGQVVGTI 356