Pairwise Alignments

Query, 329 a.a., ribosomal large subunit pseudouridine synthase C from Agrobacterium fabrum C58

Subject, 318 a.a., ribosomal large subunit pseudouridine synthase C from Pseudomonas putida KT2440

 Score =  192 bits (489), Expect = 7e-54
 Identities = 118/308 (38%), Positives = 178/308 (57%), Gaps = 14/308 (4%)

Query: 2   AGIEHIKVEADEAGMRLDRWFKIHYPGLGFGQLQKLLRSGQVRVDGGRVKTDARVQPGQM 61
           +G++ I+V  + AG R+D +      G+    + ++LR G+VRV+ GRVK + ++Q G +
Sbjct: 9   SGVQLIEVAPELAGQRIDNFLITALKGVPKTLVYRILRKGEVRVNKGRVKPEYKIQAGDI 68

Query: 62  VRVPPVDSDMKTKTGPIGSKDLKHSADGELLARMLLHEDDKVLVFNKPAGIAVQGGSGVN 121
           VRVPPV    + +  P+    L+       L   +++ED  ++V NKPAGIAV GGSG++
Sbjct: 69  VRVPPVRLPERDEPAPVAQGLLQR------LEAAIVYEDKALIVMNKPAGIAVHGGSGLS 122

Query: 122 RHIDGLLEAWTS--PKGEKPRLVHRLDRDTSGVLVVARTRGAAQKLTAAFRERDTKKTYW 179
               G++EA     P  ++  LVHRLDRDTSG+L++A+ R   + L AA R     K Y 
Sbjct: 123 F---GVIEALRQLRPDAKELELVHRLDRDTSGLLMIAKKRSMLRHLHAALRGDGVDKRYM 179

Query: 180 ALVRGVPRKHQDKISTWLVKEQTPDGDRMRIAKHGEEGADHAISYYRVIDTAAQNLAWLE 239
           ALVRG     + +++  L+K     G+RM   +  EEG + A++ +RV+         +E
Sbjct: 180 ALVRGHWPTSKKQVNAPLLKSNLRSGERM--VEVNEEGKE-ALTLFRVLRRFGDFATIVE 236

Query: 240 MEPYTGRTHQLRVHALHMGHPIIGDPKYYIDDPNWDFPGGVQKRLHLHARHIDIPHPNGG 299
             P TGRTHQ+RVH LH GH I GD KY  +D + +      KRL LHA  + +P P+GG
Sbjct: 237 ARPITGRTHQIRVHTLHAGHMIAGDSKYGDEDFSREIRELGGKRLFLHAYALTVPLPDGG 296

Query: 300 RLRVSAPL 307
            L++ AP+
Sbjct: 297 ELKLEAPV 304