Pairwise Alignments

Query, 329 a.a., ribosomal large subunit pseudouridine synthase C from Agrobacterium fabrum C58

Subject, 225 a.a., RNA pseudouridine synthase from Magnetospirillum magneticum AMB-1

 Score =  135 bits (340), Expect = 9e-37
 Identities = 86/224 (38%), Positives = 121/224 (54%), Gaps = 12/224 (5%)

Query: 90  ELLARMLLHEDDKVLVFNKPAGIAVQGGSGVNRHIDGLLEAWTSPKGEKPRLVHRLDRDT 149
           +LLAR LL+ D  VL+ +KPAG+AV  G     H+   L+A +     +P L HRLDR+T
Sbjct: 2   DLLAR-LLYRDPAVLIIDKPAGLAVHAGPKGGEHLMLYLDALSFGLKRRPELAHRLDRET 60

Query: 150 SGVLVVARTRGAAQKLTAAFRERDTKKTYWALVRGVPRKHQDKISTWLVKEQTPDGDRMR 209
           SG LV+ RT  A   L   F +    KTYWA+V G PR+ Q  I   L K +   G RM 
Sbjct: 61  SGCLVLGRTSKALAGLGELFAKGLADKTYWAVVVGKPREDQGVIDYALKKREKKFGWRME 120

Query: 210 IAKHGEEGADHAISYYRVIDTAAQNLAWLEMEPYTGRTHQLRVHALHMGHPIIGDPKYYI 269
           + + G      +++ +R++ +  + L+WLE  P TGRTHQ+R H   +GHP++GD  Y  
Sbjct: 121 VDRTGLA----SVTQWRLLGSDGR-LSWLECRPLTGRTHQIRAHCAAIGHPLVGDSIYGR 175

Query: 270 DDPNWDFPGGVQKRLHLHARHIDIP-HPNGGRLRVSAPLPPHMV 312
                        RL LH+R I +P H     +   AP+P HM+
Sbjct: 176 GTGTL-----AGDRLMLHSRRIVLPFHAGKPPIAAEAPVPEHML 214