Pairwise Alignments

Query, 80 a.a., putative RNA-binding protein Hfq from Agrobacterium fabrum C58

Subject, 86 a.a., RNA-binding protein Hfq from Pseudomonas simiae WCS417

 Score = 78.2 bits (191), Expect = 2e-20
 Identities = 34/69 (49%), Positives = 56/69 (81%), Gaps = 1/69 (1%)

Query: 4  RSQNLQDLFLNTVRKQKISLTIFLINGVKLTGVVTSFDNFCVLLRRDGHSQLVYKHAIST 63
          +  +LQD +LNT+RK+K+ ++I+L+NG+KL G + SFD F +LL ++  SQ+VYKHAIST
Sbjct: 3  KGHSLQDPYLNTLRKEKVGVSIYLVNGIKLQGTIESFDQFVILL-KNTVSQMVYKHAIST 61

Query: 64 IMPGQPMQM 72
          ++P +P+++
Sbjct: 62 VVPVRPIRL 70