Pairwise Alignments

Query, 753 a.a., two component sensor kinase from Agrobacterium fabrum C58

Subject, 593 a.a., Alginate biosynthesis sensor protein KinB from Pseudomonas putida KT2440

 Score =  105 bits (263), Expect = 5e-27
 Identities = 112/445 (25%), Positives = 198/445 (44%), Gaps = 48/445 (10%)

Query: 310 LIVLLVAIWTAIAVADRIVRPIRLLISAADSVATGNMHVLVPVRAVDGDVGRLSRTFNKM 369
           L+VL++   TA  +A R  +PI  L  AAD +  GN  V +PV     ++ +L+R F  M
Sbjct: 178 LVVLVLGFITAHNIARRFGQPIEALAKAADQLGKGNFDVTLPVTQA-AELNQLTRRFGLM 236

Query: 370 VSELRSQQEQIIEAKDDIDDRRRFIEAVLSGVTAAVIGIDENRRITIVNPSGEEFLALNF 429
              LR  Q   +   D++   ++ ++AVL  +   ++ ID   R+  +NP  +  L  N 
Sbjct: 237 ADALRKHQATNV---DELLAGQQRLQAVLDSIDDGLLIIDRQGRLEHLNPVAQRQLGWN- 292

Query: 430 DQLLGAQLSEI--APEIDQVVTEANTWARGNFRKQ----INIMRRGKERTLNVQVTREDA 483
           D  LG+ L E    PE++Q + +     RG    +    +N+    + R L   +T    
Sbjct: 293 DSRLGSSLVEALQRPELEQQLRQV---LRGGSLDRPPDDLNMEVDEESRLLTYSLTPVSH 349

Query: 484 RDGRD-SYVITLDDITDLVIAQRSTAWSDVARRIAHEIKNPLTPIQLSAERIKRR--FGK 540
             G     V+ L D+T+    +R    S+   R +HE++ P+T + ++   ++ R  F  
Sbjct: 350 PQGPILGAVMVLHDVTEQRAFER--VRSEFVLRASHELRTPVTGMHMAFGLLRERVKFPP 407

Query: 541 QIDENDRAIFDQCTDTIVRQVGDIGRMVDEFSAFARMPKPTKEKSDLRSILKD------A 594
           +  END        +TI  ++  + +++++   F+R     ++       + D      +
Sbjct: 408 EAREND------LLETIGEEMQRLTQLINDLLNFSRYQSGLQKLELAPCAIDDLLDHAQS 461

Query: 595 AFLREISAADTKFSTEFGDIPLEGM-FDARMLGQAFGNLIKNATEAIEAVEGEKRPGKIL 653
            F  + +    +   E  D PL  +  D   L +   NL+ N      A+      G+I 
Sbjct: 462 RFAEQAAHKQIELIKEL-DPPLPRIQADVAQLDRVLDNLLHN------AIRHTANGGRIR 514

Query: 654 VRASFDEANSRFVADIIDNGRGLPVENRHRILEPYMTMRDK--GTGLGLAIVKKIIEEHG 711
           + A       R +  + DNG G+    + RI EP++ +  K  G GLGLA+ K+I++ HG
Sbjct: 515 LHAR--RHAERVIISVEDNGEGISYGQQARIFEPFVQVGRKKGGAGLGLALCKEIVQLHG 572

Query: 712 GYLELHDAPAEFDHGHGAMIRVLLP 736
           G + +   P     G G    + LP
Sbjct: 573 GRMGVFSRP-----GQGTQFYMALP 592