Pairwise Alignments

Query, 281 a.a., 2-dehydro-3-deoxyphosphooctonate aldolase from Agrobacterium fabrum C58

Subject, 284 a.a., 3-deoxy-D-manno-octulosonate 8-phosphate synthase from Escherichia coli BL21

 Score =  237 bits (604), Expect = 2e-67
 Identities = 129/274 (47%), Positives = 177/274 (64%), Gaps = 6/274 (2%)

Query: 9   VTAGDGASKVSFCNTERFSLIAGPCQMESRDHAFMIAGVLKELCDSLGIGLVYKSSFDKA 68
           V+ GD    ++  N   F L  G   +ESRD A  I      +   LGI  V+K+SFDKA
Sbjct: 6   VSIGD----INVANDLPFVLFGGMNVLESRDLAMRICEHYVTVTQKLGIPYVFKASFDKA 61

Query: 69  NRTSLSGKRGIGLDSAMEIFADLKKEFGFPVLSDIHTEEQCAIVSEVVDVLQIPAFLSRQ 128
           NR+S+   RG GL+  M+IF +LK+ FG  +++D+H   Q   V++VVDV+Q+PAFL+RQ
Sbjct: 62  NRSSIHSYRGPGLEEGMKIFQELKQTFGVKIITDVHEPSQAQPVADVVDVIQLPAFLARQ 121

Query: 129 TDLLVAAAKTGRVINVKKGQFLAPWDMKNVLAKLNESGNPNVLLCERGASFGYNTLVSDM 188
           TDL+ A AKTG VINVKK QF++P  M N++ K  E GN  V+LC+RGA+FGY+ LV DM
Sbjct: 122 TDLVEAMAKTGAVINVKKPQFVSPGQMGNIVDKFKEGGNEKVILCDRGANFGYDNLVVDM 181

Query: 189 RSLPIM--ASLGAPVIFDATHSVQQPGGQGGSTGGQREFVETLARAAVAVGVAGLFIETH 246
               IM   S  +PVIFD TH++Q     G ++GG+R  V  LARA +AVG+AGLFIE H
Sbjct: 182 LGFSIMKKVSGNSPVIFDVTHALQCRDPFGAASGGRRAQVAELARAGMAVGLAGLFIEAH 241

Query: 247 EDPDNAPSDGPNMVHLKDMPKLLEKLLAFDAITK 280
            DP++A  DGP+ + L  +   L+++ A D + K
Sbjct: 242 PDPEHAKCDGPSALPLAKLEPFLKQMKAIDDLVK 275