Pairwise Alignments

Query, 611 a.a., long-chain-fatty-acid-CoA-ligase from Agrobacterium fabrum C58

Subject, 627 a.a., p-coumarate CoA-ligase (EC 6.2.1.12) (from data) from Pseudomonas putida KT2440

 Score =  506 bits (1302), Expect = e-147
 Identities = 265/580 (45%), Positives = 359/580 (61%), Gaps = 3/580 (0%)

Query: 26  DPLGPYPQKLNERLLHWCRSAPERTWMADRQGREPWRRVSYAEALDKIRRIGQFLLDHDL 85
           +PL P P +L ERL+HW +  P+ T++A RQ    WR +SY + L  +R I   LL   L
Sbjct: 43  EPLAPLPARLLERLVHWAQVRPDTTFIAARQADGAWRSISYVQMLADVRTIAANLLGLGL 102

Query: 86  SVERPLLVLSENSIEHALMVLAAQHVGIASAAITPAYAT-SADLTKLADIRGQITPGMVF 144
           S ERPL +LS N IEH  + L A + GIA   ++PAYA  S D  KL  +   +TPG+VF
Sbjct: 103 SAERPLALLSGNDIEHLQIALGAMYAGIAYCPVSPAYALLSQDFAKLRHVCEVLTPGVVF 162

Query: 145 AEDATPFRRALGEVFDDGTPLVGLRNLPEDRSNTFHFETLLETEPTEAVDRAFDAVGPDT 204
             D+ PF+RA   V DD   ++ +R     R +   F++LL+     A D AF A GPDT
Sbjct: 163 VSDSQPFQRAFEAVLDDSVGVISVRGQVAGRPH-ISFDSLLQPGDLAAADAAFAATGPDT 221

Query: 205 VAKFLFTSGTTGSPKAVIQTQRMLCSNQEMIADCYGYFREEPPVVVDWAPWNHTAAGNKV 264
           +AKFLFTSG+T  PKAVI TQRMLC+NQ+M+   +  F EEPPV+VDW PWNHT  G+  
Sbjct: 222 IAKFLFTSGSTKLPKAVITTQRMLCANQQMLLQTFPTFAEEPPVLVDWLPWNHTFGGSHN 281

Query: 265 FNLVLYNGGTYYIDRGKPSPAQIGQTLDNLRDISPTWYFNVPAGHEMLVQAMRKDEALCR 324
             +VLYNGG++Y+D GKP+P    +TL NLR+ISPT Y  VP G E LV+A+ +D AL  
Sbjct: 282 LGIVLYNGGSFYLDAGKPTPQGFAETLRNLREISPTAYLTVPKGWEELVKALEQDPALRE 341

Query: 325 SFFRDLKMLMYAGAGMAQHTWDALTELSMATVGHAVLMGAGLGSTETAPFSLFCTEPQDK 384
            FF  +K+  +A AG++Q  WD L  ++    G  + M AGLG TE +P   F T P   
Sbjct: 342 VFFARIKLFFFAAAGLSQSVWDRLDRIAEQHCGERIRMMAGLGMTEASPSCTFTTGPLSM 401

Query: 385 PGNIGIPAQGVTMKLVPFDGRYELRLKGPNITPGYWRNGELTAAAFDEEGFYRIGDTVKF 444
            G +G+PA G  +KLVP   + E R +GP+I PGYWR+ + TA AFDEEGFY  GD +K 
Sbjct: 402 AGYVGLPAPGCEVKLVPVGDKLEARFRGPHIMPGYWRSPQQTAEAFDEEGFYCSGDALKL 461

Query: 445 AVADDPRRGFYFDGRMAENFKLQTGTWVAVGPLRAQLVNMFAGLIRDAVITGENRAELGA 504
           A A  P  G  FDGR+AE+FKL +G +V+VGPLR + V   +  ++D V+T  +R  LG 
Sbjct: 462 ADARQPELGLMFDGRIAEDFKLSSGVFVSVGPLRNRAVLEGSPYVQDIVVTAPDRECLGL 521

Query: 505 LVVPFIPALRELVRGSQHLSDAEIIRHPSVRAQIVAKLSAHQKQASGSASRVMRILVMED 564
           LV P +P  R L   ++  SDA ++ + +VR+     L    + A G+ASR+  + ++ +
Sbjct: 522 LVFPRLPECRRLAGLAEDASDARVLANDTVRSWFADWLERLNRDAQGNASRIEWLSLLAE 581

Query: 565 ALRFEKGEVTDKGSINQRAVLLHRKELVESLY-GDTPQVI 603
               + GE+TDKGSINQRAVL  R   VE+LY G+ P  +
Sbjct: 582 PPSIDAGEITDKGSINQRAVLQRRAAQVEALYRGEDPDAL 621