Pairwise Alignments

Query, 405 a.a., ABC transporter, substrate binding protein (sugar) from Agrobacterium fabrum C58

Subject, 436 a.a., Various polyols ABC transporter, substrate-binding protein from Variovorax sp. SCN45

 Score = 49.3 bits (116), Expect = 2e-10
 Identities = 84/337 (24%), Positives = 133/337 (39%), Gaps = 49/337 (14%)

Query: 8   LIAATMATALASWAAPALAKDKITFAAAVFAEAGRGDRVKAWIQK----FNESQDKVEVE 63
           L+ A + T + S AA  L          V A    G  ++  +QK    F ++   ++++
Sbjct: 9   LVLALIGTGVVSQAATEL----------VIATVNNGHMIE--MQKLTPFFEKANPDIKLK 56

Query: 64  PIAIPFSSLANTVFTQMGGGGGP-DLVRFDQTDFFAAIPSGRLLPL-DDMISDKDHEFLG 121
            + +   +L   V T +   GG  D++     +       G L P+  D   D D     
Sbjct: 57  WVTLEEGTLRQRVTTDIATKGGQFDVMTIGLYEAPIWSKKGWLKPIATDAAYDIDDLLPA 116

Query: 122 PDRFMKVKDVRYGLLFDTTGYALLYNKDI-------LPEPPK--DFESFLAAAKEKTKDG 172
               +  +   Y   F      L+Y KD+        P+ P     + F   A +  K+G
Sbjct: 117 IRNGLSYEGKLYAAPFYGESSMLMYRKDLADKVGVKFPDQPTWAQVKEFADKANDP-KNG 175

Query: 173 VYGYAYRATMAERAGFWQD----LCNYVFGFGGRWSDKDGKLTLNSPDVIKGVTAYKQVY 228
           VYG   R         W D    L   V   GG+W D   K  +++      +T Y  + 
Sbjct: 176 VYGMCLRGKPG-----WGDNMAFLTTLVNTNGGQWFDMQWKPQIDTKAWKDAITFYVDIM 230

Query: 229 DAAVTPRGADAATYRR---MFWEGKIAMNVDNGGVAAIF------NQNAPQLNFAAAPSP 279
                P+GA A ++     +F EGK A  VD   +AA F      ++ A ++ FA AP+ 
Sbjct: 231 KKD-GPQGASANSFNENLALFNEGKCAAWVD-ATIAASFISDPKQSRVADKVAFAQAPTA 288

Query: 280 F-PDKAQGLIMTALVVNANTKHKDAAGAFIKWAYSPE 315
             P  A  L    L + A++   +AA  FIKWA S +
Sbjct: 289 VTPKGANWLWSWNLAIPASSTKDEAAQKFIKWATSKD 325