Pairwise Alignments

Query, 405 a.a., ABC transporter, substrate binding protein (sugar) from Agrobacterium fabrum C58

Subject, 437 a.a., sorbitol ABC transporter substrate-binding protein from Agrobacterium fabrum C58

 Score = 56.6 bits (135), Expect = 1e-12
 Identities = 87/341 (25%), Positives = 133/341 (39%), Gaps = 33/341 (9%)

Query: 12  TMATALASWAAPALAKDKITFAAAV-FAEAGRGD--RVKAWIQKFNESQDKVEVEPIAIP 68
           T+ T L   A  ALA   +  A  +  A    GD  R++     F      ++VE + + 
Sbjct: 2   TLKTILLG-ACSALAFSTLASAETLTIATVNNGDMIRMQGLTSDFTTKNPDIKVEWVTLE 60

Query: 69  FSSLANTVFTQMGGGGGP-DLVRFDQTDFFAAIPSGRLLPLDDMISDKDHEFLGPD--RF 125
            + L   V T +   GG  D++     +       G LLPL+ +    D + + P     
Sbjct: 61  ENVLRERVTTDIATNGGQYDIMTIGNYEVPIWAKQGWLLPLEKLGEKYDVDDILPAIRGG 120

Query: 126 MKVKDVRYGLLFDTTGYALLYNKDI-----LPEPPKDFESFLAAAKEKTKD---GVYGYA 177
           +  +   Y   F      ++Y KD+     L  P      F+  A  K  D    + G  
Sbjct: 121 LSAEGKLYAAPFYGESAMIMYRKDLFEKAGLKMPDNPTWEFIGDAARKITDRKTDINGMC 180

Query: 178 YR--ATMAERAGFWQDLCNYVFGFGGRWSDKDGKLTLNSPDVIKGVTAYKQVYDAAVTPR 235
            R  A   E   F   L N    FGGRW D++ K   + P+    +  Y  +   A  P 
Sbjct: 181 LRGKAGWGENMAFISALTN---SFGGRWFDENWKPQFDQPEWKSALQFYVDLMKDA-GPS 236

Query: 236 GADAATYRR---MFWEGKIAMNVDNGGVAAIFNQN------APQLNFAAAPSPFPDKAQG 286
           GA +  +     +F +GK  M +D   VAA F  N      A ++ +A  P+    K  G
Sbjct: 237 GASSNGFNENLTLFQQGKCGMWID-ATVAASFVSNPKDSTVADKVGYALFPTHGELKNHG 295

Query: 287 --LIMTALVVNANTKHKDAAGAFIKWAYSPENQKGLQAAMG 325
             L    L +  +++  DAA  FI WA S E  + + A  G
Sbjct: 296 NWLWSWNLAIPKSSQKADAAEKFISWATSKEYTQLVAAKEG 336