Pairwise Alignments

Query, 305 a.a., ABC transporter, membrane spanning protein from Agrobacterium fabrum C58

Subject, 308 a.a., sugar ABC transporter permease from Agrobacterium fabrum C58

 Score =  142 bits (357), Expect = 1e-38
 Identities = 92/280 (32%), Positives = 149/280 (53%), Gaps = 4/280 (1%)

Query: 17  TPYLFAAPVGIYLLLFQFYPLVQQFFMSFTATDLLTPNVNPFVGIENYSFLIEDGELWKV 76
           T YLF AP  I +++F   PLV  F+ S    ++L  +   F GI NY  L+ D  + +V
Sbjct: 26  TGYLFIAPQLIGIVVFVLVPLVLVFWYSLHEWNVLAGSFR-FTGIANYQKLLSDPAIGEV 84

Query: 77  LWITAIYTVACVIFAIGTGLGSAMLLDSPFFGRGIARALITVPWAAPSVAVALVFTWIFN 136
           L +TA+++    +  +   LG A+LL+       + R L   P     VA  +V++++  
Sbjct: 85  LAVTAVFSAGLALLNMSLALGLALLLNQQLAFMTMFRTLFFSPVVVSLVAWTIVWSFLLQ 144

Query: 137 SQYGIFNRVLTGLGLPFGGENWLDDPNLALPAILLTTVWQIFPFSSVVILAALQGVPHEL 196
           +  GI N +L  +G+   G NWL  P  A+ ++++    +    + ++ LAALQGVP EL
Sbjct: 145 NNGGI-NGLLQMIGVE--GPNWLRHPTTAMISVIVVQALKNVGLNMILFLAALQGVPREL 201

Query: 197 KEAAVIDGADRLNIFKTATWPTIQPTVLMLTLFVTIWSLRRFDLIWLMTQGGPIGATNTL 256
            EAA +DG  R   F   T P I PT+L+ ++   + +L+ F  I ++TQGGP  +T  L
Sbjct: 202 FEAARVDGVPRFKQFYRITLPMISPTILLASIVTIVGALQVFAQIMILTQGGPGFSTTVL 261

Query: 257 VIELYRQGFVYRDLGSAASIGMIGLSIALLVTVIYFKVTR 296
           V  LY+Q F +   G  +++ +I L I   +T I + + R
Sbjct: 262 VYYLYQQAFQFYLFGYGSTLSIILLVIVGALTFIQWHLRR 301