Pairwise Alignments

Query, 277 a.a., ABC transporter, membrane spanning protein from Agrobacterium fabrum C58

Subject, 280 a.a., Inner membrane ABC transporter permease protein YcjP from Escherichia coli HS(pFamp)R (ATCC 700891)

 Score =  157 bits (396), Expect = 3e-43
 Identities = 89/266 (33%), Positives = 146/266 (54%), Gaps = 9/266 (3%)

Query: 17  LFMLGFAAFPIYWMFVTSMTPSSELFAPFPRLVPDWSQLGIYLEVFDTI--PVTTWLKNS 74
           LF++    FP + M +TS   + E  +  P L+P    L  Y+++F+ +  P   + +NS
Sbjct: 19  LFLI-ITLFPFFVMLMTSFKGAKEAISLHPTLLPQQWTLEHYVDIFNPMIFPFVDYFRNS 77

Query: 75  FLVATGTTVLSILLAVLPAYALSRFRFAGLAILGFALFATQMLPEAMLVVPLYSIFGDLN 134
            +V+  ++V+++ L +L AYALSR RF G   +  + +   M    +LVVPL+ I   L 
Sbjct: 78  LVVSVVSSVVAVFLGILGAYALSRLRFKGRMTINASFYTVYMFSGILLVVPLFKIITALG 137

Query: 135 LLNTIPGLVLANTAFVVPVITWIIKGAIDGIPIEIEEAARVDGCSRLDIVLGIIIPLIAP 194
           + +T   L++      +P   +++K   D IP EIEEAA +DG +RL I+  I +PL   
Sbjct: 138 IYDTEMALIITMVTQTLPTAVFMLKSYFDTIPDEIEEAAMMDGLNRLQIIFRITVPLAMS 197

Query: 195 TLAAAAVISFFHGWNEYVFAQTLISSENLRTASVGLASFVGELSTPIH---SVMAVGVIY 251
            L +  V  F   WN+Y+FA   +SS +  T  VGL +     STP +    +MA  ++ 
Sbjct: 198 GLISVFVYCFMVAWNDYLFASIFLSSASNFTLPVGLNAL---FSTPDYIWGRMMAASLVT 254

Query: 252 TLPAIVFYLFAQRYVVAGMTAGSVKG 277
            LP ++ Y  ++R++ +G+TAG VKG
Sbjct: 255 ALPVVIMYALSERFIKSGLTAGGVKG 280