Pairwise Alignments

Query, 277 a.a., ABC transporter, membrane spanning protein from Agrobacterium fabrum C58

Subject, 280 a.a., Inner membrane ABC transporter permease protein YcjP from Escherichia coli ECRC100

 Score =  159 bits (403), Expect = 5e-44
 Identities = 92/279 (32%), Positives = 150/279 (53%), Gaps = 10/279 (3%)

Query: 4   TTGNAHFVRILAVLFMLGFAAFPIYWMFVTSMTPSSELFAPFPRLVPDWSQLGIYLEVFD 63
           T     F R LA+  ++    FP + M +TS   + E  +  P L+P    L  Y+++F+
Sbjct: 7   TLSRIGFYRGLALFLII--TLFPFFVMLMTSFKSAKEAISLHPTLLPQQWTLEHYVDIFN 64

Query: 64  TI--PVTTWLKNSFLVATGTTVLSILLAVLPAYALSRFRFAGLAILGFALFATQMLPEAM 121
            +  P   + +NS +V+  ++V+++ L +L AYALSR RF G   +  + +   M    +
Sbjct: 65  PVIFPFVDYFRNSMVVSVVSSVVAVFLGILGAYALSRLRFKGRMTINASFYTVYMFSGIL 124

Query: 122 LVVPLYSIFGDLNLLNTIPGLVLANTAFVVPVITWIIKGAIDGIPIEIEEAARVDGCSRL 181
           LVVPL+ I   L + +T   L++      +P   +++K   D IP EIEEAA +DG +RL
Sbjct: 125 LVVPLFKIITALGIYDTEMALIITMVTQTLPTAVFMLKSYFDTIPDEIEEAAMMDGLNRL 184

Query: 182 DIVLGIIIPLIAPTLAAAAVISFFHGWNEYVFAQTLISSENLRTASVGLASFVGELSTPI 241
            I+  I +PL    L +  V  F   WN+Y+FA   +SS +  T  VGL +     STP 
Sbjct: 185 QIIFRITVPLAMSGLISVFVYCFMVAWNDYLFASIFLSSASNFTLPVGLNAL---FSTPD 241

Query: 242 H---SVMAVGVIYTLPAIVFYLFAQRYVVAGMTAGSVKG 277
           +    +MA  ++  LP ++ Y  ++R++ +G+TAG VKG
Sbjct: 242 YIWGRMMAASLVTALPVVIMYALSERFIKSGLTAGGVKG 280