Pairwise Alignments

Query, 234 a.a., ABC transporter, membrane spanning protein (amino acid) from Agrobacterium fabrum C58

Subject, 258 a.a., polar amino acid ABC transporter permease from Pseudomonas simiae WCS417

 Score =  115 bits (288), Expect = 8e-31
 Identities = 74/230 (32%), Positives = 121/230 (52%), Gaps = 16/230 (6%)

Query: 2   NFSLHFEAVFAESDLIWRGILLTIGLSATAIVLGTMIAVALVAMRSLGNGTIRFCVDSYV 61
           N+ + ++ +   S +   G+ LT  ++ +A++LG ++ +A   +R   N  +   V  YV
Sbjct: 4   NWDVFWQYLLQPSGVYLTGLWLTCLIAVSAMLLGCVLGLAAALLRLSKNPLLHLPVRFYV 63

Query: 62  ELLRNTPFLVQLFMVFFGLPLVG-FRMS-----------GTQAALFAMTLNLSAYATEII 109
            L+R TP LVQ+  ++  L   G FR               QAA+ A+ LN  AY  EII
Sbjct: 64  WLMRGTPLLVQIVFLYTALAAGGIFRFEDIDLFGLVVPGNIQAAIIALGLNEGAYMAEII 123

Query: 110 RAGVESIHRSQVEAGLSLSLSRLQVFRYVVMKPAFAKIWPALSSQFVLMLLASSICSFIS 169
           RAG+ ++ + Q EAG SL +   ++ R +V+  AF  I P L ++F +ML  +++ S I 
Sbjct: 124 RAGIGAVDKGQYEAGRSLGMGFAKLMRRIVLPQAFRVIVPPLGNEFNVMLKNTTLVSVIG 183

Query: 170 VPELSGAASIIEQRTFRSFETYIVVTVIYLLLALALKIILAWFGHWLFRR 219
           V EL  +  ++   TFR FE Y+VV + +L+L      +  +F  WL  R
Sbjct: 184 VQELLLSTQMVTSATFRVFELYLVVAIYFLMLT----TLWGFFQRWLEAR 229