Pairwise Alignments

Query, 261 a.a., ABC transporter, substrate binding protein (amino acid) from Agrobacterium fabrum C58

Subject, 266 a.a., ABC transporter glutamine-binding protein GlnH from Azospirillum sp. SherDot2

 Score =  168 bits (425), Expect = 1e-46
 Identities = 97/255 (38%), Positives = 143/255 (56%), Gaps = 6/255 (2%)

Query: 5   RLLLAIAAVSVTLGFSPA----AFADALGDISSRGTIRVAVPQDFPPFGSVGTDMAPQGY 60
           R L A  AV  T+  S A    A ADAL ++ S G +RV V  D  P+G         G 
Sbjct: 5   RTLAAAVAVCATVALSAALPSAAKADALQNVLSAGKLRVGVLMDAAPWGFKDAKGEAAGL 64

Query: 61  DIDVANLIGEKLGVKVELVPVTSANRVPYLQTNKVDLVISSLGKNPDREKVIDFSTAYAP 120
           DID+A L+   +GVK++LV VT ANR+P L  NKVD++I++ G  P+R + + F+  YA 
Sbjct: 65  DIDLAKLMAADMGVKLDLVQVTGANRIPSLLANKVDVLIAAAGATPERAQQVTFTQPYAA 124

Query: 121 FFNGVFAPDSV-TVAKAEDLSGKTIGVTRGAVEDLELTKVAPADTTIKRYEDNNGTISAF 179
              GV+ P S+ T +  E L G++IGV +G+  D+ LT  AP    + R+ED  G I+A+
Sbjct: 125 VNLGVYGPKSMATASDPEGLKGRSIGVAKGSTLDIWLTDNAPG-AKLVRFEDTPGAIAAY 183

Query: 180 LAGQVEAVATGNVVAAAILAKNPPKRPELKFLIKNSPCYIGLNKEQPALLEKVNAIIATA 239
           LAGQV+  A  + +A  +   NP K  ELKFLI+ SP ++ +   +  L+  +N  +   
Sbjct: 184 LAGQVDTFAENSAIALKVAQDNPGKEVELKFLIRQSPAHVAVRHGEQDLVNWINTFLFYN 243

Query: 240 KTDGSLNTIAQKWLK 254
           + +G L  +   W K
Sbjct: 244 RLNGKLGALQMTWFK 258