Pairwise Alignments

Query, 288 a.a., transcriptional regulator, LysR family from Agrobacterium fabrum C58

Subject, 301 a.a., LysR family transcriptional regulator from Pseudomonas simiae WCS417

 Score =  122 bits (305), Expect = 1e-32
 Identities = 90/291 (30%), Positives = 145/291 (49%), Gaps = 12/291 (4%)

Query: 3   LPPLATLRAFESAARKASFALAAQELGMTATAVSQHVRNLEAWLGVALFERHARGVRLTP 62
           LPP ATLRAFE A R A+F  A++EL +T +AVS  +++LE   G+ LF+R  + +RLTP
Sbjct: 4   LPPTATLRAFEVATRHATFTSASEELHVTQSAVSHQLKHLEDLWGLQLFQR-GKSLRLTP 62

Query: 63  AGMEFGNTVSGSLRQIASGAERIRRGHDRMTVRLASLPSVVAHFLTPRLPRFRASHPDIQ 122
           AG      V      + +    +R    R+ +++++  S    +L PRLP     HP+I 
Sbjct: 63  AGAALAPIVREFFVNLETTLTDLREQKGRVRLKVSTTYSFALKWLLPRLPGLSQQHPEIL 122

Query: 123 VSISYSG-AQHTSAAD----LTIGHGISFGENAVALFSAETRPTCAPSYIASAGPFNDEA 177
           +++  S  A + S+AD    + +G+G     ++  +   +  P  +P  +   G  ++ A
Sbjct: 123 ITLETSDKAINFSSADSDVAIRLGNGHYPALHSEFMLREQIFPVASPDLLNRFGAPHEPA 182

Query: 178 SLLRAELL---HDDTETAWRDWFA-VGDMSLPYGAGPIFADFNLLVTALKAGQGIGLCPT 233
            LLR  LL     D    W  WF  VG           FAD N+ + A   GQGI L  +
Sbjct: 183 ELLRYPLLMRDGADLVPKWEAWFEHVGVSVAALKESVRFADTNMTIEAALLGQGIALARS 242

Query: 234 ALLRKEIAEGQLTVLFDRAVDTDKYYWLIRPEEMTASARLLA--DWLVAEA 282
             +  EI +G L  LFD    +   Y+ + P+ +     +++  +WL+AE+
Sbjct: 243 GHVEAEINDGSLVRLFDVPFASPVAYFFVCPKGIETQPHIVSFRNWLLAES 293