Pairwise Alignments

Query, 836 a.a., ATP-dependent Clp protease, ATP-binding subunit from Agrobacterium fabrum C58

Subject, 940 a.a., putative Chaperone-associated ATPase from Pseudomonas putida KT2440

 Score =  481 bits (1238), Expect = e-140
 Identities = 300/805 (37%), Positives = 441/805 (54%), Gaps = 98/805 (12%)

Query: 9   EKALHQALTFANERHHEYATLEHLLLALIDDADAAAVMAACNVDLDALRKTVSDYVDNEL 68
           E  L +A   A E        EHLLLAL D      +++   + +D L++ +    + E 
Sbjct: 134 EALLQEAAKRATEFGRSEVDTEHLLLALADSDVVKTILSQFKIKVDELKRQI----EAEA 189

Query: 69  TNLVTGYDEDSKPTSGFQRVIQRAVIHVQSSGREEVTGANVLVAIFAERESHAAYFLQEQ 128
                 ++ +   +   +  + RA +     G   V   + L+ +  E E  AA  L+  
Sbjct: 190 KRGDKPFEGEVGVSPRVKDALSRAFVASNELGHAYVGPEHFLIGLAEEGEGLAANLLRRY 249

Query: 129 EMTRYDAVNYISHGIGKRPGTSQTRAPRGADEPESESKPSRGNPEEDGSSAKKQQDALKA 188
            +        +S  +GK  G    RA    + PE                       L  
Sbjct: 250 GLMPQALRQCVSKVVGK--GAEDGRAEAPTETPE-----------------------LDK 284

Query: 189 YCVNLNDKARNGKIDPLIGRHDEVNRTIQILCRRSKNNPLYVGDPGVGKTAIAEGLAKRI 248
           Y  +L   AR+GK+DP+IGR  E+  TI++L RR KNNP+ +G+PGVGKTAI EGLA+R+
Sbjct: 285 YSRDLTRMARDGKLDPVIGRAQEIETTIEVLARRKKNNPVLIGEPGVGKTAIVEGLAQRM 344

Query: 249 VEGKVPEALANDTIFSLDMGTLLAGTRYRGDFEERLKQVVKELEEFPG-AVLFIDEIHTV 307
           V G+VPE L +  +  L++ +L+AG +YRG+FEER+++V+KE+ E  G  +LFIDE+HT+
Sbjct: 345 VAGEVPETLRDKRLVELNINSLVAGAKYRGEFEERVQKVLKEIAEHQGELILFIDEVHTI 404

Query: 308 IGAGATSG-GAMDASNLLKPALSSGAIRCIGSTTYKEYRQFFEKDRALVRRFQKIDVNEP 366
           +GAG   G G +D +N+ KP ++ G +  IG+TT  EY+++ E+D AL RRFQ + V EP
Sbjct: 405 VGAGQGGGEGGLDVANVFKPMMARGELNLIGATTLNEYQKYIEQDAALERRFQPVVVPEP 464

Query: 367 SIDDAIAIMKGLKPYFEDYHHLRYSNEAIKAAVELSARYISDRKLPDKAIDVIDETGAAQ 426
           ++   I I++GL+  FE +H +  + EAI AA ELS RY+S R LPDKAID++D+  AA+
Sbjct: 465 TVAQTIMILRGLRDTFEAHHKVSITEEAIIAAAELSDRYVSARFLPDKAIDLLDQ-AAAR 523

Query: 427 MLLPASKRRKLITERE----------------------------IEATIATMAR------ 452
           + L A+ R   + E E                            +EAT A + +      
Sbjct: 524 VKLSATARPVAVQEMESELHQLRREQDYAASRKQYDNAAQISKRVEATEAELKQRVEEWE 583

Query: 453 ------------------------IPPKTVSKDDEMVLANLEKELRSVVYGQDIAIEALA 488
                                   IP   ++ ++   L +LE+ L   + GQD A+ A+A
Sbjct: 584 RERGSGSTEVKAEHVAQIVSRLTGIPVNELTVEEREKLLHLEQRLHERLVGQDEAVRAVA 643

Query: 489 TAIKLARAGLREPNKPIGSYVFSGPTGVGKTEVAKQLAASL-GVE--MLRFDMSEYMERH 545
            A++L+RAGLRE +KP+ +++F G TGVGKTE+AK LA ++ G E  +LR DMSEY ERH
Sbjct: 644 DAVRLSRAGLREGSKPVATFLFLGSTGVGKTELAKALAETIYGDESALLRIDMSEYGERH 703

Query: 546 TVSRLLGAPPGYVGFDQGGLLTDGVDQHPHSVVLLDEIEKAHPDIYNILLQVMDHGSLTD 605
           +V+RL+GAPPGYVG+D+GG LT+ V + P+SV+LLDEIEKAH D+YNILLQV D G LTD
Sbjct: 704 SVARLVGAPPGYVGYDEGGQLTEKVRRKPYSVLLLDEIEKAHADVYNILLQVFDDGRLTD 763

Query: 606 HNGKKIDFRNVILIMTTNAGASEM-----AKSAIGFGSSRRTGEDEEAINRLFTPEFRNR 660
             G+ +DF N I+I T+N G+  +     A  A G    +   E  E +   F PEF NR
Sbjct: 764 GKGRVVDFTNTIIIATSNLGSDIIQRRLKAPGAAGEEYEKTKVEVMEVLRGHFRPEFLNR 823

Query: 661 LDAIIPFSPLPTAVIHKVVQKFVMQLETQLSERNVTFDLHEDAISWLAEKGYDEKMGARP 720
           +D II F  L    I  +V   + ++    + + VT    E  +  LA+ GY  + GAR 
Sbjct: 824 IDEIIVFHALGKQEIRHIVGLQLERVARNAASQGVTLTFDETLVDHLAQVGYKPEFGARE 883

Query: 721 LSRVIQEHIKKPLANEILFGKLKKG 745
           L R+I+  ++  LA E+L G + KG
Sbjct: 884 LKRLIRSELETALAREMLGGGIGKG 908



 Score = 33.9 bits (76), Expect = 4e-05
 Identities = 21/62 (33%), Positives = 33/62 (53%), Gaps = 2/62 (3%)

Query: 5   SPSLEKALHQALTFANERHHEYATLEHLLLALIDDAD--AAAVMAACNVDLDALRKTVSD 62
           SP ++ AL +A   +NE  H Y   EH L+ L ++ +  AA ++    +   ALR+ VS 
Sbjct: 203 SPRVKDALSRAFVASNELGHAYVGPEHFLIGLAEEGEGLAANLLRRYGLMPQALRQCVSK 262

Query: 63  YV 64
            V
Sbjct: 263 VV 264