Pairwise Alignments

Query, 649 a.a., Tetracycline resistance protein, tetM/tetO subfamily from Agrobacterium fabrum C58

Subject, 542 a.a., Peptide chain release factor 3 from Variovorax sp. SCN45

 Score =  140 bits (352), Expect = 2e-37
 Identities = 117/462 (25%), Positives = 208/462 (45%), Gaps = 44/462 (9%)

Query: 2   RTLNLGILAHVDAGKTSLTERLLFDVGVIDKLGSVD----TGNTQTDSLELERQRGITIR 57
           R     I++H DAGKT+LTE+LL   G I   GSV     + +  +D +E+E+QRGI++ 
Sbjct: 9   RRRTFAIISHPDAGKTTLTEKLLLFSGAIQIAGSVKARKASRHATSDWMEIEKQRGISVA 68

Query: 58  AAVVSFTIGDTVVNLIDTPGHPDFIAEVERVLGLLDAAVVVVSAVEGVQAQTRVLVRALQ 117
           ++V+     D V+NL+DTPGH DF  +  RVL  +D+A++V+ A  GV+AQTR L+   +
Sbjct: 69  SSVMQMLYRDHVINLLDTPGHKDFSEDTYRVLTAVDSALMVIDAANGVEAQTRRLIEVCR 128

Query: 118 RLAVPFLFFINKVDRVGARYDEVVRDLADQLRVRPVVMSKITGAGSKHVQVAATDTECEP 177
           +   P + F+NK+DR      +++ ++  +L +  V M+   G G     +    T+   
Sbjct: 129 QRDTPIITFVNKMDREVREPLDILDEVERELGMPCVPMTWPVGQGKTFRGIMNLRTQAMT 188

Query: 178 LFTILCETLAE-------NDDELLRDYLLTPDRVDAGRLSLLLGQQTA-------CGVVH 223
           +F    E L +       ++ E L              + L  G   A        G   
Sbjct: 189 VFESGSERLPQDFETIPLSERETLTKRFGADFETAMESMELATGASPAWDREAFLAGKQT 248

Query: 224 PAFAGVAMTGAGLPALIAAITEMLPA----------------RDPDPEG-EISGKIFKIE 266
           P F G  +   G+  ++ A+ ++ P+                ++  PE  + +G +FK++
Sbjct: 249 PVFFGSGVNNFGVMEVLDALVDLAPSPQSRTSTTLVNRQPVVKEIQPEDKDFAGVVFKVQ 308

Query: 267 RGWGG---EKLSYLHLASG--TVRLRHILPLPQGPARLTGIQLFKDGRVQNANSLGAGQI 321
                   ++++++ +ASG  T  ++  +       R T +  F   R +      AG I
Sbjct: 309 ANMDANHRDRIAFVRMASGKYTPGMKLKVQRTSKELRPTSVVTFMSQRREAVEEAYAGDI 368

Query: 322 ARVTGLAGARVGDSV--GVDAVADGAFHFAPPTLETRVVSRRPSEHAALWLALNQMVEQD 379
              T   G ++GD++  G      G   FAP    T V+ + P     L   L Q+ E+ 
Sbjct: 369 VGFTTHGGVQLGDTITDGASLQFTGLPFFAPELFMT-VILKNPLRTKQLQQGLAQLGEEG 427

Query: 380 PLIGLRRNDETNEVFVSLYGEVQKQIIQSELSTGFGIEAEFE 421
             I + R +    + +   G++Q +++Q  L   +  +   E
Sbjct: 428 -AIQVFRPEVGGPMLLGAVGQLQFEVVQHRLKAEYDADVRLE 468