Pairwise Alignments

Query, 815 a.a., penicillin-binding protein 1a from Agrobacterium fabrum C58

Subject, 741 a.a., Biosynthetic peptidoglycan transglycosylase from Xanthobacter sp. DMC5

 Score =  174 bits (441), Expect = 2e-47
 Identities = 109/320 (34%), Positives = 164/320 (51%), Gaps = 31/320 (9%)

Query: 413 AGDVVYAQPLSGSGNEYRLRQPPKVQGGMVVMDPHTGRVLAMVGGFSYAQSEFNRSTQAM 472
           AG+      L+ SG +Y + Q     G +VV+DP  G V A++GG SYA S++NR+  A 
Sbjct: 378 AGEAALEDTLAKSGTKYGVGQ-----GAIVVLDPDGG-VKALIGGRSYADSQYNRAVTAR 431

Query: 473 RQPGSSFKPFIYAAALDNGYTPASVILDAPIEVVSGGQVWKPQNYGGGSAGPSTLRLGIE 532
           RQPGS+FKPFIY  A+++G  P SV  DAPI++    + W+P+N      GP TL   + 
Sbjct: 432 RQPGSAFKPFIYLTAVEHGLNPESVREDAPIQL----KGWRPENSTRDYRGPVTLTTALA 487

Query: 533 KSRNLMTVRLAQDMGMNLVAEYAERFGIYDKMPPLLSMSLGSGETTVMRMVSAYSVLANG 592
            S N ++VRL  + G   V + A R GI   + P  S++LG+ E +V+ +  AY+  ANG
Sbjct: 488 LSLNTVSVRLVLEFGPKAVVQTAHRMGISSNLDPNPSIALGTSEVSVLELAGAYTPFANG 547

Query: 593 GKQIKPTLIDRIQDRYGKTIFRHEERGCEGCNATSWQNQDEPVIVDNREQVLDPMTAYQT 652
           G  + P +ID +    GK ++     G     A+ +               +  M    T
Sbjct: 548 GLGVMPHVIDSVIGPDGKPLYERNVTGMGRVVASEY---------------VAMMNHMMT 592

Query: 653 TSMLEGVVKRGTAAGKIKVDLPVAGKTGTTNDEKDAWFVGYTPDMVAGLYIGFDSPAPLG 712
            ++  G  +R    G        AGKTGT+ D +DAWFVGYT   V  +++G D  +P  
Sbjct: 593 QTLATGTARRADLPG-----WEAAGKTGTSQDYRDAWFVGYTAKYVTAVWLGNDDSSPT- 646

Query: 713 RGGTGGSLSAPIFGEFIADA 732
           +  +G +L   I+   +  A
Sbjct: 647 KKASGANLPVEIWSRVMKAA 666



 Score =  170 bits (430), Expect = 3e-46
 Identities = 108/316 (34%), Positives = 166/316 (52%), Gaps = 13/316 (4%)

Query: 6   GYFFGLASVLFLCAAVVGAIYLHGVTKDLPDYAVLSTYEPPVTTRVHAGNGALMAEYAHE 65
           G+  G+ ++L L   +            LP    L   + P T  V   +G  +A     
Sbjct: 93  GFILGMWALLALAGVIAYE------ASKLPPMQTLMIPKRPPTVTVQGADGKTIATRGDM 146

Query: 66  KRLFLPIQAIPDRVKAAFLSAEDKNFYNHPGVDIWGLGRAILVNLQNLGSGRRPVGASTI 125
             + +PI  +P  +  AF++ ED+ FY+H G+D  GL RA++ NL    S R   G ST+
Sbjct: 147 GGVAVPIGELPPYLPKAFVAIEDQRFYSHFGLDPEGLARALVTNLT---SRRLRQGGSTL 203

Query: 126 TQQVAKNFLLTNDQTIDRKLKEAILSFRIEQTYSKDKILELYLNEIFFGLNSYGIAGAAL 185
           TQQ+AKN  LT ++T  RK++E +L+  +E  +SKD++L+LYLN ++FG  +YG+  AA 
Sbjct: 204 TQQLAKNLFLTQERTASRKMQELVLALWLEHKFSKDQLLDLYLNRVYFGAGAYGVEAAAQ 263

Query: 186 TYFNKSVTELTIAETAYLASLPKGPANYHPIRREKAALERRDWVIDRMAENGYITVADAT 245
            YF KS  ++T+AE A LA L   P+   P R  K A  R + V+  M +   I+   A+
Sbjct: 264 RYFGKSARQVTLAEAAMLAGLVNSPSRLAPTRNLKGAQTRANLVLAAMRDQKMISADMAS 323

Query: 246 DAKKQPLGVNLRRGGAHIAASDYFAEEVRRQIVEKYGEEALLEGGLSVRTSFDPQIQMEA 305
            A+ +P    L R G    +S Y A+ V  Q+    G +  L G ++VRT+ DP +Q   
Sbjct: 324 TAQARP--AQLARSGMP-DSSGYVADWVMDQLDSVLG-DGELPGDVTVRTTIDPALQKAG 379

Query: 306 RKALQDGLVQYDERRG 321
             AL+D L +   + G
Sbjct: 380 EAALEDTLAKSGTKYG 395