Pairwise Alignments

Query, 815 a.a., penicillin-binding protein 1a from Agrobacterium fabrum C58

Subject, 773 a.a., transglycosylase/transpeptidase from Pseudomonas putida KT2440

 Score =  167 bits (424), Expect = 2e-45
 Identities = 96/261 (36%), Positives = 155/261 (59%), Gaps = 8/261 (3%)

Query: 65  EKRLFLPIQAIPDRVKAAFLSAEDKNFYNHPGVDIWGLGRAILVNLQNLGSGRRPVGAST 124
           E R+ + I  +P  +    ++ ED+ FY+H GV    + RA+ VN     SG    G ST
Sbjct: 166 EDRILIKIDQVPKYLLETLVATEDREFYSHFGVSPKSIVRAMWVNTS---SGSMRQGGST 222

Query: 125 ITQQVAKNFLLTNDQTIDRKLKEAILSFRIEQTYSKDKILELYLNEIFFGLNS----YGI 180
           +TQQ+ KNF L++++++ RKL EA+++  +E  Y K +ILE YLNE+F G +     +G 
Sbjct: 223 LTQQLVKNFYLSSERSLSRKLTEAMMAVLLELHYDKREILEAYLNEVFVGQDGQRAVHGF 282

Query: 181 AGAALTYFNKSVTELTIAETAYLASLPKGPANYHPIRREKAALERRDWVIDRMAENGYIT 240
             A+  +F++ ++EL + + A L  + KGP+ Y+P R  + AL RR+ V+D +AE G  +
Sbjct: 283 GLASQFFFSQPLSELKLHQIALLVGMVKGPSYYNPRRHPERALARRNLVLDLVAEQGVAS 342

Query: 241 VADATDAKKQPLGVNLRRGGAHIAASDYFAEEVRRQIVEKYGEEALLEGGLSVRTSFDPQ 300
            A+   AKK PLGV  +RG    ++   F + V+RQ+ + Y +E L E GL + TSFDP 
Sbjct: 343 QAEVDAAKKMPLGVT-KRGSLADSSFPAFLDLVKRQLRQDYRDEDLTEEGLRIFTSFDPI 401

Query: 301 IQMEARKALQDGLVQYDERRG 321
           +QM+A  ++ +   +   R+G
Sbjct: 402 LQMKAETSMSETFKRLAGRKG 422



 Score =  134 bits (336), Expect = 3e-35
 Identities = 90/290 (31%), Positives = 140/290 (48%), Gaps = 27/290 (9%)

Query: 437 VQGGMVVMDPHTGRVLAMVGGFSYAQSEFNRSTQAMRQPGSSFKPFIYAAALD--NGYTP 494
           V+  MVV +P TG V A++G      + FNR+  A+R  GS  KP +Y  AL+  + YT 
Sbjct: 426 VEAAMVVTNPETGEVQALIGSRQAGFAGFNRAIDAVRPIGSLVKPSVYLTALEQPSKYTL 485

Query: 495 ASVILDAPIEVVSG-GQVWKPQNYGGGSAGPSTLRLGIEKSRNLMTVRLAQDMGMNLVAE 553
            S + D P  V    GQVW+PQNY     G   L  G+  S NL T +L  ++G+  V +
Sbjct: 486 TSWVQDEPFSVKGADGQVWRPQNYDRRPHGTIYLYQGLANSYNLSTAKLGLEVGVPNVIK 545

Query: 554 YAERFGIYDKMPPLLSMSLGSGETTVMRMVSAYSVLANGGKQIKPTLIDRIQDRYGKTIF 613
              R G+    P   +M LG+G  + M++ + Y  +ANGG       I  +    G+ + 
Sbjct: 546 TIGRLGVNVDWPAFPAMLLGAGGMSPMQVATMYQTIANGGFNTPMRGIRSVLTAEGEPLK 605

Query: 614 RHEERGCEGCNATSWQNQDEPVIVDNREQVLDPMTAYQTTSMLEGVVKRGTAA---GKIK 670
           R+                  P  +   +Q  DP   Y   + ++ V++ GT       + 
Sbjct: 606 RY------------------PFQI---QQTFDPGAIYLVQNAMQRVMREGTGRSVYNTLP 644

Query: 671 VDLPVAGKTGTTNDEKDAWFVGYTPDMVAGLYIGFDSPAPLGRGGTGGSL 720
             L +AGKTGT+ND +D+WF G++ D++A +++G D        G  G+L
Sbjct: 645 RSLTLAGKTGTSNDSRDSWFSGFSQDLLAVVWMGRDDNGKTPFTGATGAL 694