Pairwise Alignments

Query, 419 a.a., N-acetylmuramoyl-L-alanine amidase from Agrobacterium fabrum C58

Subject, 476 a.a., N-acetylmuramoyl-L-alanine amidase from Pseudomonas putida KT2440

 Score =  175 bits (443), Expect = 3e-48
 Identities = 134/409 (32%), Positives = 201/409 (49%), Gaps = 37/409 (9%)

Query: 26  ALAFFVATLVSVVPTAHAAEPLVAHQARIIGDEARTRIVLDFAEEPEFDVHYLDSPARIV 85
           AL   V  L++ V T  A         R+      TR+V D +   +  V  L +P R+V
Sbjct: 5   ALVAIVGLLLTTV-TVEALAVTQVKSMRLWRAPDNTRLVFDLSGPVQHSVFTLSAPDRLV 63

Query: 86  VDFPAVNFAFPTSDLKPTGLFSDIRFGTMGENSARIVLTAKK---PVQVTVAETKKGDDG 142
           +D      A P +        S +R         R+V+  KK   P   T+A   +  + 
Sbjct: 64  IDINGATLAAPLNVATSNTPISSVRSAQRTPTDLRVVVDLKKSVTPKSFTLAPNAQYGN- 122

Query: 143 QSFRFVLDAEITTKGKFAELVKDQQWRAPAPVTTAAITPDDKTS--RPA----------- 189
              R V+D         A         APAPV T A TP    +  +PA           
Sbjct: 123 ---RLVVDLYDQEADAIAASAPPP---APAPVQTPATTPAVPVTPAQPAIKLPPVPSGKR 176

Query: 190 EFVIAVDAGHGGIDAGATGGTTGTEEKVITLTFAKELVERLNREAGIKAFLTRDSDTFLA 249
           + V+A+DAGHGG D GA+G + G  EK I L  AKEL  ++N E G +A LTR  D F+ 
Sbjct: 177 DIVVAIDAGHGGEDPGASG-SRGQHEKDIVLQIAKELQRQINSEKGFRAELTRTGDYFIP 235

Query: 250 LSERVTIARQNNANLFISLHADTLKQKGIRGATVYTLSDR-ASDRQAQELAERENKSDQI 308
           L +R  IAR+  A+LFIS+HAD    +   GA+V+ LSDR A+   A+ LA+ EN+SD I
Sbjct: 236 LRKRTEIARKKGADLFISIHADAAPSRAAFGASVFALSDRGATSETARWLADTENRSDLI 295

Query: 309 AG---VAASTEPPEVADILLDFTRRETQAFSVTLAENIVSSFEGQVGLINNPHR----YA 361
            G   V+   +   +A +LLD +   T + S+ + + ++    G +G + + H+     A
Sbjct: 296 GGAGNVSLDDKDRMLAGVLLDLSMTATLSSSLNVGQKVL----GNMGRVTSLHKQRVEQA 351

Query: 362 GFMVLRAHDVPSVLLELGFLSNAEDEKLLLDIEWRKKVADTLATAVGRY 410
           GFMVL++ D+PS+L+E GF+SN  +   L     ++ +A ++ T V +Y
Sbjct: 352 GFMVLKSPDIPSILVETGFISNNNEAAKLASSSHQQALARSIRTGVHQY 400