Pairwise Alignments

Query, 419 a.a., N-acetylmuramoyl-L-alanine amidase from Agrobacterium fabrum C58

Subject, 445 a.a., N-acetylmuramoyl-l-alanine amidase II from Escherichia coli BL21

 Score =  135 bits (340), Expect = 2e-36
 Identities = 83/250 (33%), Positives = 139/250 (55%), Gaps = 17/250 (6%)

Query: 176 TAAITPDDKTSRPA---------EFVIAVDAGHGGIDAGATGGTTGTEEKVITLTFAKEL 226
           T  +   +  +RPA         + +IA+DAGHGG D GA G   GT EK +T+  A++L
Sbjct: 168 TTGVISSNTVTRPAARATANTGDKIIIAIDAGHGGQDPGAIG-PGGTREKNVTIAIARKL 226

Query: 227 VERLNREAGIKAFLTRDSDTFLALSERVTIARQNNANLFISLHADTLKQKGIRGATVYTL 286
              LN +   K  LTRD D F+++  R  +AR+ NAN  +S+HAD    +   GA+V+ L
Sbjct: 227 RTLLNDDPMFKGVLTRDGDYFISVMGRSDVARKQNANFLVSIHADAAPNRSATGASVWVL 286

Query: 287 SD-RASDRQAQELAERENKSDQIAG----VAASTEPPEVADILLDFTRRETQAFSVTLAE 341
           S+ RA+   A  L + E +S+ + G    +A S   P ++  +LD     +Q     +A 
Sbjct: 287 SNRRANSEMASWLEQHEKQSELLGGAGDVLANSQSDPYLSQAVLDLQFGHSQRVGYDVAT 346

Query: 342 NIVSSFEGQVGLINNPH-RYAGFMVLRAHDVPSVLLELGFLSNAEDEKLLLDIEWRKKVA 400
           +++S  + ++G I+     +A   VLR+ D+PSVL+E GF+SN  +E+LL   ++++++A
Sbjct: 347 SMISQLQ-RIGEIHKRRPEHASLGVLRSPDIPSVLVETGFISNNSEERLLASDDYQQQLA 405

Query: 401 DTLATAVGRY 410
           + +   +  Y
Sbjct: 406 EAIYKGLRNY 415